RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 CERS5Q8N5B7 392 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 TBC1D16Q8TBP0 767 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 FAM84AQ96KN4 292 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 IGSF9BQ9UPX0 1349 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 FAM86B1E9PN63 330 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 DDX3XO00571 662 aaKnown RBP eCLIP17.49■□□□□ 0.391e-21■■■□□ 17.2
DKC1-213ENST00000620277 TBCAO75347 108 aaKnown RBP17.49■□□□□ 0.39
DKC1-213ENST00000620277 CFBP00751 764 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 SHBGP04278 402 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 FAM86B2P0C5J1 330 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 ZNF844Q08AG5 666 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 GIT2Q14161 759 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 ASPRV1Q53RT3 343 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 KIRREL3Q8IZU9 778 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 CABS1Q96KC9 395 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
DKC1-213ENST00000620277 PNMA2Q9UL42 364 aa17.49■□□□□ 0.39
DKC1-213ENST00000620277 FRMD3A2A2Y4 597 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 PGRMC1O00264 195 aaKnown RBP17.48■□□□□ 0.39
DKC1-213ENST00000620277 CLSTN1O94985 981 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 NR3C1P04150 777 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 IRX3P78415 501 aaPredicted RBP17.48■□□□□ 0.39
DKC1-213ENST00000620277 ARHGAP4P98171 946 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 PSMD2Q13200 908 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 ITGB3BPQ13352 177 aaPredicted RBP17.48■□□□□ 0.39
DKC1-213ENST00000620277 TPCN2Q8NHX9 752 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 PCDHGC5Q9Y5F6 944 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 EML1O00423 815 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 CALCAP01258 141 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 KNOP1Q1ED39 458 aaKnown RBP17.48■□□□□ 0.39
DKC1-213ENST00000620277 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
DKC1-213ENST00000620277 PCDHA2Q9Y5H9 948 aa17.48■□□□□ 0.39
DKC1-213ENST00000620277 EVI5O60447 810 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 B4GALNT4Q76KP1 1039 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 OTUD6AQ7L8S5 288 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 BTBD6Q96KE9 485 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 OPLAHO14841 1288 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 PROM2Q8N271 834 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 SLC35G2Q8TBE7 412 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 ARHGEF26Q96DR7 871 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 CYFIP2Q96F07 1278 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 LRRC27Q9C0I9 530 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 ERVK-5Q9HDB9 667 aa17.47■□□□□ 0.39
DKC1-213ENST00000620277 SERPINB2P05120 415 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 SHMT1P34896 483 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 USP11P51784 963 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 KDM7AQ6ZMT4 941 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 CCDC121Q6ZUS5 278 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 ZNF622Q969S3 477 aaKnown RBP eCLIP17.46■□□□□ 0.391e-9■□□□□ 10.9
DKC1-213ENST00000620277 FLOT1O75955 427 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 ECHS1P30084 290 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 KCNJ1P48048 391 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 HOOK2Q96ED9 719 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 HAUS2Q9NVX0 235 aa17.46■□□□□ 0.39
DKC1-213ENST00000620277 CAND2O75155 1236 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 EPB41P11171 864 aaKnown RBP17.46■□□□□ 0.38
DKC1-213ENST00000620277 PLCG2P16885 1265 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 MARCKSL1P49006 195 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 SLC12A3P55017 1021 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 DRAP1Q14919 205 aaPredicted RBP17.46■□□□□ 0.38
DKC1-213ENST00000620277 LRRC14Q15048 493 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 GLE1Q53GS7 698 aaKnown RBP17.46■□□□□ 0.38
DKC1-213ENST00000620277 CDCA7Q9BWT1 371 aaPredicted RBP17.46■□□□□ 0.38
DKC1-213ENST00000620277 ZC3H12CQ9C0D7 883 aaKnown RBP17.46■□□□□ 0.38
DKC1-213ENST00000620277 THAP2Q9H0W7 228 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 TMBIM4Q9HC24 238 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.46■□□□□ 0.38
DKC1-213ENST00000620277 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.38
DKC1-213ENST00000620277 GUCY2CP25092 1073 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 VPS41P49754 854 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 SKOR1P84550 965 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 BANK1Q8NDB2 785 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 WHAMMQ8TF30 809 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 TBC1D31Q96DN5 1066 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.45■□□□□ 0.381e-8■■□□□ 12.9
DKC1-213ENST00000620277 ISCUQ9H1K1 167 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 AIPL1Q9NZN9 384 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 DNAJC12Q9UKB3 198 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 CD2APQ9Y5K6 639 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 FAM13AO94988 1023 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 ITIH3Q06033 890 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 PPP4R3AQ6IN85 833 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 CCDC13Q8IYE1 715 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 CEP63Q96MT8 703 aa17.45■□□□□ 0.38
DKC1-213ENST00000620277 DDX20Q9UHI6 824 aaKnown RBP17.45■□□□□ 0.38
DKC1-213ENST00000620277 XIRP1Q702N8 1843 aaKnown RBP17.45■□□□□ 0.38
DKC1-213ENST00000620277 STAT1P42224 750 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 CBWD6Q4V339 395 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 CBWD3Q5JTY5 395 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 CBWD5Q5RIA9 395 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 MCTP2Q6DN12 878 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 CDC42EP5Q6NZY7 148 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms