RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 DDX42Q86XP3 938 aaKnown RBP eCLIP14.28□□□□□ -0.12
SKP2-209ENST00000620197 CATSPER3Q86XQ3 398 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 TATDN2Q93075 761 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 ANKIB1Q9P2G1 1089 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 CAPN7Q9Y6W3 813 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 MEIS2O14770 477 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 HADHBP55084 474 aaKnown RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 TTBK2Q6IQ55 1244 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 ALKBH5Q6P6C2 394 aaKnown RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 LRRC47Q8N1G4 583 aaKnown RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 CCDC24Q8N4L8 307 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 MAGEC3Q8TD91 643 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 GOLPH3Q9H4A6 298 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 PCDHA3Q9Y5H8 950 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 GCOM1H8Y6P7 765 aaPredicted RBP14.27□□□□□ -0.12
SKP2-209ENST00000620197 CETN3O15182 167 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 NUDT17P0C025 328 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 MYZAPP0CAP1 466 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 MTMR3Q13615 1198 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 ZNF568Q3ZCX4 644 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 GPATCH4Q5T3I0 446 aaKnown RBP14.27□□□□□ -0.12
SKP2-209ENST00000620197 WLSQ5T9L3 541 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 RPAINQ86UA6 219 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 KLHL7Q8IXQ5 586 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 ARFGAP2Q8N6H7 521 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 OR2W6PQ8NHA6 318 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 TBC1D7Q9P0N9 293 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 VAV3Q9UKW4 847 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 MYH11P35749 1972 aa14.27□□□□□ -0.12
SKP2-209ENST00000620197 DCDC2CA8MYV0 355 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 RPA1P27694 616 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 MRPL12P52815 198 aaKnown RBP14.27□□□□□ -0.13
SKP2-209ENST00000620197 PSMC6P62333 389 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 PPP2R2AP63151 447 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.13
SKP2-209ENST00000620197 TAX1BP1Q86VP1 789 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 OTUD6BQ8N6M0 293 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 TMEM174Q8WUU8 243 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 ADAM7Q9H2U9 754 aa14.27□□□□□ -0.13
SKP2-209ENST00000620197 USP17L10C9JJH3 530 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 PTENP60484 403 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 DUPD1Q68J44 220 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 KCTD17Q8N5Z5 321 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 REEP2Q9BRK0 252 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.26□□□□□ -0.13
SKP2-209ENST00000620197 PSTPIP2Q9H939 334 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 F8W031 263 aaPredicted RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 DNM1LO00429 736 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 ATP2B4P23634 1241 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 CCDC91Q7Z6B0 441 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 SLFN12Q8IYM2 578 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 MKL1Q969V6 931 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 ZNF317Q96PQ6 595 aaPredicted RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 FIZ1Q96SL8 496 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 GLT8D2Q9H1C3 349 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 OLFML3Q9NRN5 406 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 TYW1Q9NV66 732 aaKnown RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 ARMCX3Q9UH62 379 aaPredicted RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 TGFB1I1O43294 461 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 DRD4P21917 467 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 DRG2P55039 364 aaKnown RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 KLRC3Q07444 240 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 EXOC3L4Q17RC7 722 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 ANKRD20A8PQ5CZ79 823 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 POTEGQ6S5H5 508 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 POTEEQ6S8J3 1075 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 RUFY4Q6ZNE9 571 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 ARMC9Q7Z3E5 817 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 TBC1D22AQ8WUA7 517 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 CCT6BQ92526 530 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 RAPGEF5Q92565 580 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 AP1M1Q9BXS5 423 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 DDX47Q9H0S4 455 aaKnown RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 CCDC134Q9H6E4 229 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 ACTR5Q9H9F9 607 aaPredicted RBP14.26□□□□□ -0.13
SKP2-209ENST00000620197 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
SKP2-209ENST00000620197 IGSF9BQ9UPX0 1349 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 FLOT1O75955 427 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 CIITAP33076 1130 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
SKP2-209ENST00000620197 ERMARDQ5T6L9 678 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 FAM228AQ86W67 206 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 DNAAF5Q86Y56 855 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 TACO1Q9BSH4 297 aaKnown RBP14.25□□□□□ -0.13
SKP2-209ENST00000620197 SUGT1Q9Y2Z0 365 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 NR2E1Q9Y466 385 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 DAPK3O43293 454 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 POLD1P28340 1107 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 STAT3P40763 770 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 DPP8Q6V1X1 898 aaPredicted RBP14.25□□□□□ -0.13
SKP2-209ENST00000620197 SLF2Q8IX21 1173 aa14.25□□□□□ -0.13
SKP2-209ENST00000620197 SYCE1Q8N0S2 351 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms