RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
C9orf50-202ENST00000619117 ZBED2Q9BTP6 218 aa17.2■□□□□ 0.34
C9orf50-202ENST00000619117 UPF2Q9HAU5 1272 aaKnown RBP17.2■□□□□ 0.34
C9orf50-202ENST00000619117 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 CDH23Q9H251 3354 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.19■□□□□ 0.34
C9orf50-202ENST00000619117 LCHNA4D1U4 455 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
C9orf50-202ENST00000619117 PPP2R5CQ13362 524 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 KIAA0319LQ8IZA0 1049 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 MYOCDQ8IZQ8 938 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 CELF4Q9BZC1 486 aaKnown RBP17.19■□□□□ 0.34
C9orf50-202ENST00000619117 AGO3Q9H9G7 860 aaKnown RBP17.19■□□□□ 0.34
C9orf50-202ENST00000619117 VAV3Q9UKW4 847 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 COL4A6Q14031 1691 aa17.19■□□□□ 0.34
C9orf50-202ENST00000619117 BTBD18B2RXH4 712 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 MAGEB2O15479 319 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 FOSBP53539 338 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 HTRA4P83105 476 aaPredicted RBP17.18■□□□□ 0.34
C9orf50-202ENST00000619117 TMEM62Q0P6H9 643 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 ADGRE1Q14246 886 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 HAS1Q92839 578 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 TOP1MTQ969P6 601 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 NRBP2Q9NSY0 501 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 INSL6Q9Y581 213 aa17.18■□□□□ 0.34
C9orf50-202ENST00000619117 CD52P31358 61 aa17.17■□□□□ 0.34
C9orf50-202ENST00000619117 TARBP2Q15633 366 aaKnown RBP17.17■□□□□ 0.34
C9orf50-202ENST00000619117 XKR3Q5GH77 459 aa17.17■□□□□ 0.34
C9orf50-202ENST00000619117 FAM117BQ6P1L5 589 aa17.17■□□□□ 0.34
C9orf50-202ENST00000619117 FAM43BQ6ZT52 329 aaPredicted RBP17.17■□□□□ 0.34
C9orf50-202ENST00000619117 TRMT1LQ7Z2T5 733 aaKnown RBP17.17■□□□□ 0.34
C9orf50-202ENST00000619117 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
C9orf50-202ENST00000619117 C8orf76Q96K31 380 aa17.17■□□□□ 0.34
C9orf50-202ENST00000619117 MYH9P35579 1960 aaKnown RBP17.17■□□□□ 0.34
C9orf50-202ENST00000619117 LINC01553A4QN01 128 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 EML1O00423 815 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 ST18O60284 1047 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 STBD1O95210 358 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 PSMC5P62195 406 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 SAFBQ15424 915 aaKnown RBP eCLIP17.16■□□□□ 0.34
C9orf50-202ENST00000619117 SLFN12Q8IYM2 578 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 SLC17A8Q8NDX2 589 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 FTHL17Q9BXU8 183 aa17.16■□□□□ 0.34
C9orf50-202ENST00000619117 NIFKQ9BYG3 293 aaKnown RBP17.16■□□□□ 0.34
C9orf50-202ENST00000619117 EPOPA6NHQ4 379 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 CLCN3P51790 818 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 PAK2Q13177 524 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 ZNF710Q8N1W2 664 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 METTL13Q8N6R0 699 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 BANK1Q8NDB2 785 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 LINC01599Q8WXQ3 324 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 ARNTL2Q8WYA1 636 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 TGS1Q96RS0 853 aaKnown RBP17.15■□□□□ 0.34
C9orf50-202ENST00000619117 MAP7D2Q96T17 732 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 YME1L1Q96TA2 773 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 SEPT9Q9UHD8 586 aaPredicted RBP17.15■□□□□ 0.34
C9orf50-202ENST00000619117 PADI3Q9ULW8 664 aa17.15■□□□□ 0.34
C9orf50-202ENST00000619117 WDR81Q562E7 1941 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 WNT7AO00755 349 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 ENPP3O14638 875 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 DKC1O60832 514 aaKnown RBP eCLIP17.14■□□□□ 0.33
C9orf50-202ENST00000619117 GPR32O75388 356 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
C9orf50-202ENST00000619117 VTNP04004 478 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 POU3F3P20264 500 aaPredicted RBP17.14■□□□□ 0.33
C9orf50-202ENST00000619117 TMOD1P28289 359 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 QARSP47897 775 aaKnown RBP17.14■□□□□ 0.33
C9orf50-202ENST00000619117 CRYBB1P53674 252 aaPredicted RBP17.14■□□□□ 0.33
C9orf50-202ENST00000619117 ERVK-21P61565 698 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 TBC1D8BQ0IIM8 1120 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 KIZQ2M2Z5 673 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 EFCAB12Q6NXP0 572 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 SPRED2Q7Z698 418 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 FBXO18Q8NFZ0 1043 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 TMEM40Q8WWA1 233 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 CEP89Q96ST8 783 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 TSPYL2Q9H2G4 693 aaPredicted RBP17.14■□□□□ 0.33
C9orf50-202ENST00000619117 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
C9orf50-202ENST00000619117 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 CDHR5Q9HBB8 845 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.33
C9orf50-202ENST00000619117 MARCH6O60337 910 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 NEMFO60524 1076 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
C9orf50-202ENST00000619117 IGFBP4P22692 258 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 EPHA7Q15375 998 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 CALCRLQ16602 461 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 ODR4Q5SWX8 454 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 LRRC71Q8N4P6 559 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 AKT3Q9Y243 479 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 GINS2Q9Y248 185 aa17.13■□□□□ 0.33
C9orf50-202ENST00000619117 NOC2LQ9Y3T9 749 aaKnown RBP17.13■□□□□ 0.33
C9orf50-202ENST00000619117 IGKV6-21A0A0C4DH24 114 aa17.12■□□□□ 0.33
C9orf50-202ENST00000619117 TMEM150BA6NC51 233 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms