RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 RAVER2Q9HCJ3 691 aaKnown RBP12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 DNM3Q9UQ16 869 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 PAX7P23759 505 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 RDXP35241 583 aaKnown RBP12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 PPP1R2P41236 205 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 IRAK1P51617 712 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 MAN2A1Q16706 1144 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 DLK2Q6UY11 383 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 TRMT1LQ7Z2T5 733 aaKnown RBP12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 KSR1Q8IVT5 923 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 FAXDC2Q96IV6 333 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 GDAP1L1Q96MZ0 367 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 EMILIN3Q9NT22 766 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 GUCA1BQ9UMX6 200 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 SAMM50Q9Y512 469 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.4
PCDHGA9-202ENST00000616887 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 FZD9O00144 591 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 PSMD10O75832 226 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 SLITRK3O94933 977 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 ALAS1P13196 640 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 ITGB5P18084 799 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 MAP2K1Q02750 393 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 MAP3K10Q02779 954 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 PSMD2Q13200 908 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 CEP55Q53EZ4 464 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 NOA1Q8NC60 698 aaKnown RBP12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 ERMNQ8TAM6 284 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 SH2D3AQ9BRG2 576 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 LRRC27Q9C0I9 530 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.41
PCDHGA9-202ENST00000616887 CTAGE15A4D2H0 777 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 IRF6O14896 467 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 KIF5CO60282 957 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 CTAGE8P0CG41 777 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 AARSP49588 968 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 ZNF280AP59817 542 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 KCNMA1Q12791 1236 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 MEA1Q16626 185 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 CCDC40Q4G0X9 1142 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 C9orf131Q5VYM1 1079 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 CTAGE6Q86UF2 777 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 CTAGE4Q8IX94 777 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 TSG101Q99816 390 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 HSD17B14Q9BPX1 270 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 LACRTQ9GZZ8 138 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 UNC45AQ9H3U1 944 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 A1CFQ9NQ94 594 aaKnown RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 CNOT7Q9UIV1 285 aaKnown RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 MRPL11Q9Y3B7 192 aaKnown RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 COL4A3BPQ9Y5P4 624 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 ZNF263O14978 683 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 GAS7O60861 476 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 SHOX2O60902 331 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 VCAM1P19320 739 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 NF2P35240 595 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 FKBP3Q00688 224 aaKnown RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 CLEC4DQ8WXI8 215 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 ZNF577Q9BSK1 485 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 WDR11Q9BZH6 1224 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 NHEJ1Q9H9Q4 299 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 MCM8Q9UJA3 840 aa12.51□□□□□ -0.41
PCDHGA9-202ENST00000616887 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 LRRC53A6NM62 1247 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 ENC1O14682 589 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 FLOT1O75955 427 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 GGCXP38435 758 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 ZBED6P86452 979 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 TTC19Q6DKK2 380 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 FAM160B2Q86V87 743 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 SH2D4AQ9H788 454 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 NLRC4Q9NPP4 1024 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 HPCAL4Q9UM19 191 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 ICAM1P05362 532 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 NR2F2P24468 414 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 SPP2Q13103 211 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 RINT1Q6NUQ1 792 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 FAM76AQ8TAV0 307 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 SLC5A5Q92911 643 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 TACO1Q9BSH4 297 aaKnown RBP12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
PCDHGA9-202ENST00000616887 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
PCDHGA9-202ENST00000616887 CTAGE9A4FU28 777 aa12.49□□□□□ -0.41
PCDHGA9-202ENST00000616887 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
PCDHGA9-202ENST00000616887 CLIC2O15247 247 aa12.49□□□□□ -0.41
PCDHGA9-202ENST00000616887 GCNT3O95395 438 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms