RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CDY2AQ9Y6F7 541 aa18.8■□□□□ 0.6
CBWD3-211ENST00000615061 K7ELQ4 463 aaPredicted RBP18.79■□□□□ 0.6
CBWD3-211ENST00000615061 PSMC5P62195 406 aa18.79■□□□□ 0.6
CBWD3-211ENST00000615061 MRPS6P82932 125 aaKnown RBP18.79■□□□□ 0.6
CBWD3-211ENST00000615061 CYP4A11Q02928 519 aa18.79■□□□□ 0.6
CBWD3-211ENST00000615061 PLEKHG4Q58EX7 1191 aa18.79■□□□□ 0.6
CBWD3-211ENST00000615061 TMCO2Q7Z6W1 182 aaPredicted RBP18.79■□□□□ 0.6
CBWD3-211ENST00000615061 KIAA0319LQ8IZA0 1049 aa18.79■□□□□ 0.6
CBWD3-211ENST00000615061 PBX4Q9BYU1 374 aa18.79■□□□□ 0.6
CBWD3-211ENST00000615061 NRBP2Q9NSY0 501 aa18.79■□□□□ 0.6
CBWD3-211ENST00000615061 SEPT9Q9UHD8 586 aaPredicted RBP18.79■□□□□ 0.6
CBWD3-211ENST00000615061 POTEMA6NI47 508 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 QARSP47897 775 aaKnown RBP18.78■□□□□ 0.6
CBWD3-211ENST00000615061 RABGGTBP53611 331 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 EPHA7Q15375 998 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 MTERF2Q49AM1 385 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 PLA2G4FQ68DD2 849 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 ANO5Q75V66 913 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 METTL13Q8N6R0 699 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 DYDC2Q96IM9 177 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 FAM161BQ96MY7 647 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 PPP1R16BQ96T49 567 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 LXNQ9BS40 222 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 CEP131Q9UPN4 1083 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 PCDHB6Q9Y5E3 794 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 PRUNE2Q8WUY3 3088 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 P4HBP07237 508 aaKnown RBP18.78■□□□□ 0.6
CBWD3-211ENST00000615061 ATP2A2P16615 1042 aaKnown RBP18.78■□□□□ 0.6
CBWD3-211ENST00000615061 DNAJB2P25686 324 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 TRAPPC10P48553 1259 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 CLCN3P51790 818 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 WDR5P61964 334 aaKnown RBP18.78■□□□□ 0.6
CBWD3-211ENST00000615061 DEFB103AP81534 67 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 CTTNQ14247 550 aaKnown RBP18.78■□□□□ 0.6
CBWD3-211ENST00000615061 LPIN1Q14693 890 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 TARBP2Q15633 366 aaKnown RBP18.78■□□□□ 0.6
CBWD3-211ENST00000615061 XKR3Q5GH77 459 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 LRRC71Q8N4P6 559 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 NOL7Q9UMY1 257 aaKnown RBP18.78■□□□□ 0.6
CBWD3-211ENST00000615061 GINS2Q9Y248 185 aa18.78■□□□□ 0.6
CBWD3-211ENST00000615061 DDX11L8A8MPP1 907 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 ZBTB39O15060 712 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 BAIAP3O94812 1187 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 FBXO47Q5MNV8 452 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 DEFB123Q8N688 67 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 C4orf32Q8N8J7 132 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 CEP89Q96ST8 783 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 CDHR5Q9HBB8 845 aa18.77■□□□□ 0.6
CBWD3-211ENST00000615061 VTNP04004 478 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 OR52Z1P0C646 297 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 MYOGP15173 224 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 NPEPPSP55786 919 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 IER5Q5VY09 327 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 GPR153Q6NV75 609 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 EFCAB12Q6NXP0 572 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 EIF2AK1Q9BQI3 630 aaKnown RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 NIFKQ9BYG3 293 aaKnown RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 IFIH1Q9BYX4 1025 aaKnown RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 TTYH1Q9H313 450 aaPredicted RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 AGO3Q9H9G7 860 aaKnown RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 SUGCTQ9HAC7 445 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 TRPV2Q9Y5S1 764 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 ARID2Q68CP9 1835 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 TRANK1O15050 2925 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 SLITRK3O94933 977 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 TECP42680 631 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 TBC1D8BQ0IIM8 1120 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 MKRN4PQ13434 485 aaPredicted RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 DRP2Q13474 957 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 IKBKEQ14164 716 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 TPH2Q8IWU9 490 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 LINC01465Q8N7H1 131 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 SEPT8Q92599 483 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 SNX21Q969T3 373 aa18.76■□□□□ 0.59
CBWD3-211ENST00000615061 CELF4Q9BZC1 486 aaKnown RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 YBX2Q9Y2T7 364 aaKnown RBP18.76■□□□□ 0.59
CBWD3-211ENST00000615061 ABHD14A-ACY1A0A1B0GW23 586 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 MAGEB2O15479 319 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 CD52P31358 61 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 KCNJ6P48051 423 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 PTGDRQ13258 359 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 ORC2Q13416 577 aaPredicted RBP18.75■□□□□ 0.59
CBWD3-211ENST00000615061 KIZQ2M2Z5 673 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 NME8Q8N427 588 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 TMEM40Q8WWA1 233 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 ZNF668Q96K58 619 aaPredicted RBP18.75■□□□□ 0.59
CBWD3-211ENST00000615061 HSD17B14Q9BPX1 270 aa18.75■□□□□ 0.59
CBWD3-211ENST00000615061 A0A087WWV3 80 aa18.74■□□□□ 0.59
CBWD3-211ENST00000615061 VPS37CA5D8V6 355 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-211ENST00000615061 M0QZ92 97 aa18.74■□□□□ 0.59
CBWD3-211ENST00000615061 RPLP2P05387 115 aaKnown RBP18.74■□□□□ 0.59
CBWD3-211ENST00000615061 TMEM266Q2M3C6 531 aa18.74■□□□□ 0.59
CBWD3-211ENST00000615061 FERMT3Q86UX7 667 aa18.74■□□□□ 0.59
CBWD3-211ENST00000615061 C4orf19Q8IY42 314 aa18.74■□□□□ 0.59
CBWD3-211ENST00000615061 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
CBWD3-211ENST00000615061 SLC9A7Q96T83 725 aa18.74■□□□□ 0.59
CBWD3-211ENST00000615061 AKT3Q9Y243 479 aa18.74■□□□□ 0.59
CBWD3-211ENST00000615061 YWHABP31946 246 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms