RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 PPP1R2P41236 205 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 STIM1Q13586 685 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 ACVR2BQ13705 512 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 LRRC41Q15345 812 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 CCL14Q16627 93 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 SEMA6BQ9H3T3 888 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 TBC1D7Q9P0N9 293 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 SFI1A8K8P3 1242 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 RGS2P41220 211 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 CASP5P51878 434 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 LACTBP83111 547 aaPredicted RBP15.82■□□□□ 0.12
USP39-220ENST00000613444 CCDC173Q0VFZ6 552 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 XKR9Q5GH70 373 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 XKR3Q5GH77 459 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 CDKAL1Q5VV42 579 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 OLFML2BQ68BL8 750 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 CENPPQ6IPU0 288 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 EPM2AIP1Q7L775 607 aaPredicted RBP15.82■□□□□ 0.12
USP39-220ENST00000613444 TRMT1LQ7Z2T5 733 aaKnown RBP15.82■□□□□ 0.12
USP39-220ENST00000613444 ANP32BQ92688 251 aaKnown RBP15.82■□□□□ 0.12
USP39-220ENST00000613444 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
USP39-220ENST00000613444 TRIM47Q96LD4 638 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 SPATA33Q96N06 139 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 PDLIM7Q9NR12 457 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 OLFML3Q9NRN5 406 aa15.82■□□□□ 0.12
USP39-220ENST00000613444 CASP8AP2Q9UKL3 1982 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 ADCY6O43306 1168 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 HIP1RO75146 1068 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 TBCAO75347 108 aaKnown RBP15.81■□□□□ 0.12
USP39-220ENST00000613444 GAP43P17677 238 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 CYP2B6P20813 491 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 CCNE1P24864 410 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 VEGFBP49765 207 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 IRF5Q13568 498 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 OTUD6AQ7L8S5 288 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 SCFD1Q8WVM8 642 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 P2RX5Q93086 422 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 CEP89Q96ST8 783 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 APBA2Q99767 749 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 DUSP9Q99956 384 aaKnown RBP15.81■□□□□ 0.12
USP39-220ENST00000613444 ZHX3Q9H4I2 956 aa15.81■□□□□ 0.12
USP39-220ENST00000613444 USO1O60763 962 aaKnown RBP15.8■□□□□ 0.12
USP39-220ENST00000613444 TBC1D8O95759 1140 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 OATP04181 439 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 SMPD1P17405 629 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 MAP2K2P36507 400 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 STAT5BP51692 787 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 ZNF75DP51815 510 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 TPM4P67936 248 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 HTRA3P83110 453 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 ANKRD40Q6AI12 368 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 PARVGQ9HBI0 331 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 EMSYQ7Z589 1322 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 FAM13AO94988 1023 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 GH1P01241 217 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 ZNF865P0CJ78 1059 aaPredicted RBP15.8■□□□□ 0.12
USP39-220ENST00000613444 HOXD13P35453 343 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 PSMC4P43686 418 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 LAMC2Q13753 1193 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 CCDC144BQ3MJ40 725 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 DUSP28Q4G0W2 176 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 HSP90AA4PQ58FG1 418 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 PRAMEF19Q5SWL8 479 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 MYOCDQ8IZQ8 938 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 CEP170P1Q96L14 293 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 NIFKQ9BYG3 293 aaKnown RBP15.8■□□□□ 0.12
USP39-220ENST00000613444 CYP26B1Q9NR63 512 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 SEPT9Q9UHD8 586 aaPredicted RBP15.8■□□□□ 0.12
USP39-220ENST00000613444 HTTP42858 3142 aa15.8■□□□□ 0.12
USP39-220ENST00000613444 NOP56O00567 594 aaKnown RBP15.79■□□□□ 0.12
USP39-220ENST00000613444 FCGRTP55899 365 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 FANCCQ00597 558 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 ZCWPW2Q504Y3 356 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 IQSEC1Q6DN90 963 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 APTXQ7Z2E3 356 aaKnown RBP15.79■□□□□ 0.12
USP39-220ENST00000613444 TRIM50Q86XT4 487 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 IRF2BP1Q8IU81 584 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 TIPINQ9BVW5 301 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 RNF186Q9NXI6 227 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 SEL1LQ9UBV2 794 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 ZHX1Q9UKY1 873 aaPredicted RBP15.79■□□□□ 0.12
USP39-220ENST00000613444 MYBP10242 640 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 CYP2C19P33261 490 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 TARBP2Q15633 366 aaKnown RBP15.79■□□□□ 0.12
USP39-220ENST00000613444 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 FOXR2Q6PJQ5 311 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 PLPPR4Q7Z2D5 763 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 MYCT1Q8N699 235 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 PPTC7Q8NI37 304 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 KCTD10Q9H3F6 313 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 GPRC5CQ9NQ84 441 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 XPNPEP1Q9NQW7 623 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 GABRQQ9UN88 632 aa15.79■□□□□ 0.12
USP39-220ENST00000613444 BICDL2A1A5D9 508 aa15.78■□□□□ 0.12
USP39-220ENST00000613444 XRCC5P13010 732 aaKnown RBP15.78■□□□□ 0.12
USP39-220ENST00000613444 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
USP39-220ENST00000613444 MAEAQ7L5Y9 396 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms