RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GMLQ99445 158 aa15.45■□□□□ 0.06
PCDHGA3-202ENST00000612467 GOPCQ9HD26 462 aa15.45■□□□□ 0.06
PCDHGA3-202ENST00000612467 HYOU1Q9Y4L1 999 aa15.45■□□□□ 0.06
PCDHGA3-202ENST00000612467 PCNTO95613 3336 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 EPHA7Q15375 998 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 TRADDQ15628 312 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 IQCDQ96DY2 449 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 POLR3CQ9BUI4 534 aaPredicted RBP15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 SELENOOQ9BVL4 669 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 WDR11Q9BZH6 1224 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 VCPKMTQ9H867 229 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 SIX2Q9NPC8 291 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 GCNT4Q9P109 453 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 ASTN2O75129 1339 aaPredicted RBP15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 ITGB5P18084 799 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 CEP55Q53EZ4 464 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 CCNI2Q6ZMN8 369 aaPredicted RBP15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 ZSWIM2Q8NEG5 633 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 FIZ1Q96SL8 496 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 TYW1Q9NV66 732 aaKnown RBP15.44■□□□□ 0.06
PCDHGA3-202ENST00000612467 TMCO5BA8MYB1 307 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 RBAK-RBAKDNI3L0D1 243 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 PDXKO00764 312 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 TTLL6Q8N841 843 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 SLC5A5Q92911 643 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 LXNQ9BS40 222 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 FAM184BQ9ULE4 1060 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 HPCAL4Q9UM19 191 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 GRID2IPA4D2P6 1211 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 CALUO43852 315 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 GFPT2O94808 682 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 SYF2O95926 243 aaKnown RBP15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 PRELPP51888 382 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 IQCEQ6IPM2 695 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 FOXR2Q6PJQ5 311 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 AIPL1Q9NZN9 384 aa15.43■□□□□ 0.06
PCDHGA3-202ENST00000612467 VIL1P09327 827 aaKnown RBP15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 KCNA3P22001 575 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 RXRBP28702 533 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 CAP2P40123 477 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 HNRNPH2P55795 449 aaKnown RBP15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 NAB2Q15742 525 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 CBWD6Q4V339 395 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 CBWD3Q5JTY5 395 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 CBWD5Q5RIA9 395 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 ELMO3Q96BJ8 720 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 EDEM3Q9BZQ6 932 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 PCIF1Q9H4Z3 704 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 IPO5O00410 1097 aaKnown RBP15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 ODR4Q5SWX8 454 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 SND1Q7KZF4 910 aaKnown RBP eCLIP15.42■□□□□ 0.062e-7■■■■■ 27.3
PCDHGA3-202ENST00000612467 DEFB132Q7Z7B7 95 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 GBP3Q9H0R5 595 aa15.42■□□□□ 0.06
PCDHGA3-202ENST00000612467 WNT10BO00744 389 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 EPB41P11171 864 aaKnown RBP15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 GGCXP38435 758 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 NOP2P46087 812 aaKnown RBP15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 FAM186BQ8IYM0 893 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 DAW1Q8N136 415 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 PARVGQ9HBI0 331 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 RAVER2Q9HCJ3 691 aaKnown RBP15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 STK32BQ9NY57 414 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 ZNF536O15090 1300 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 RBBP6Q7Z6E9 1792 aaKnown RBP15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 ALAS1P13196 640 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 PPP2R5CQ13362 524 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 MUM1L1Q5H9M0 696 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 ZNF772Q68DY9 489 aaPredicted RBP15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 FAM178BQ8IXR5 827 aa15.41■□□□□ 0.06
PCDHGA3-202ENST00000612467 AGPSO00116 658 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 GLI1P08151 1106 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 TCP1P17987 556 aaKnown RBP15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 DLG4P78352 724 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 CXCL9Q07325 125 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 CHURC1Q8WUH1 139 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 SYN2Q92777 582 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 BORCS6Q96GS4 357 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 SORBS3O60504 671 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 HIP1RO75146 1068 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 RNF40O75150 1001 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 SPP2Q13103 211 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 BMT2Q1RMZ1 405 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 SKIDA1Q1XH10 827 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 ZNF720Q7Z2F6 126 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 MMGT1Q8N4V1 131 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 TSEN2Q8NCE0 465 aaKnown RBP15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 CAMKK2Q96RR4 588 aa15.4■□□□□ 0.06
PCDHGA3-202ENST00000612467 FAM204AQ9H8W3 233 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms