RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GRAPLQ8TC17 118 aaPredicted RBP22.23■■□□□ 1.15
SSBP3-216ENST00000610401 C8orf37Q96NL8 207 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 P2RX7Q99572 595 aaKnown RBP22.23■■□□□ 1.15
SSBP3-216ENST00000610401 POLLQ9UGP5 575 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 GGA1Q9UJY5 639 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 IGSF9BQ9UPX0 1349 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 HMGB1P1B2RPK0 211 aaPredicted RBP22.23■■□□□ 1.15
SSBP3-216ENST00000610401 DNM1LO00429 736 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 DDX3XO00571 662 aaKnown RBP eCLIP22.23■■□□□ 1.153e-8■■■□□ 15.9
SSBP3-216ENST00000610401 RDXP35241 583 aaKnown RBP22.23■■□□□ 1.15
SSBP3-216ENST00000610401 MAP2K2P36507 400 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 ZNF543Q08ER8 600 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 PHLDB2Q86SQ0 1253 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 ATMINO43313 823 aaPredicted RBP22.22■■□□□ 1.15
SSBP3-216ENST00000610401 GDF11O95390 407 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 FAM107AO95990 144 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 CPP00450 1065 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 RPSAP08865 295 aaKnown RBP22.22■■□□□ 1.15
SSBP3-216ENST00000610401 MICALCLQ6ZW33 695 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 RUSC1Q9BVN2 902 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 ERVK-5Q9HDB9 667 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 CD2APQ9Y5K6 639 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 CTNND1O60716 968 aaKnown RBP22.22■■□□□ 1.15
SSBP3-216ENST00000610401 FLOT1O75955 427 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 TTLL1O95922 423 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 HOXD13P35453 343 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 PPP4CP60510 307 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.22■■□□□ 1.152e-7■□□□□ 10
SSBP3-216ENST00000610401 DNM3Q9UQ16 869 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 GPR75-ASB3A0A0A6YYF3 556 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 RBAK-RBAKDNI3L0D1 243 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 EVI5O60447 810 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 FNTAP49354 379 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 MYCT1Q8N699 235 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 ANO3Q9BYT9 981 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 UTP11Q9Y3A2 253 aaKnown RBP22.22■■□□□ 1.15
SSBP3-216ENST00000610401 PCDHA2Q9Y5H9 948 aa22.22■■□□□ 1.15
SSBP3-216ENST00000610401 G3V3G9 751 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 NR3C1P04150 777 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 LRRC14Q15048 493 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 DCAF8Q5TAQ9 597 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 PAXIP1Q6ZW49 1069 aaPredicted RBP22.21■■□□□ 1.15
SSBP3-216ENST00000610401 CPNE8Q86YQ8 564 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 SLC35G2Q8TBE7 412 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 IQCDQ96DY2 449 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 OSBPL7Q9BZF2 842 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 LRRC27Q9C0I9 530 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 SLC40A1Q9NP59 571 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 KLC4Q9NSK0 619 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 SERPINB13Q9UIV8 391 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 DDX39AO00148 427 aaKnown RBP22.21■■□□□ 1.15
SSBP3-216ENST00000610401 KNOP1Q1ED39 458 aaKnown RBP22.21■■□□□ 1.15
SSBP3-216ENST00000610401 ARHGEF26Q96DR7 871 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 PCIF1Q9H4Z3 704 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 AIPL1Q9NZN9 384 aa22.21■■□□□ 1.15
SSBP3-216ENST00000610401 ZBTB5O15062 677 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 TBCAO75347 108 aaKnown RBP22.2■■□□□ 1.14
SSBP3-216ENST00000610401 HSPA9P38646 679 aaKnown RBP22.2■■□□□ 1.14
SSBP3-216ENST00000610401 GIT2Q14161 759 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 FAM133BQ5BKY9 247 aaKnown RBP22.2■■□□□ 1.14
SSBP3-216ENST00000610401 NT5C3AQ9H0P0 336 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 NUCKS1Q9H1E3 243 aaKnown RBP22.2■■□□□ 1.14
SSBP3-216ENST00000610401 LEMD3Q9Y2U8 911 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 PRPF38AQ8NAV1 312 aaKnown RBP22.2■■□□□ 1.14
SSBP3-216ENST00000610401 LRRC45Q96CN5 670 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 SEC16BQ96JE7 1060 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 MTFR1LQ9H019 292 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 RNF14Q9UBS8 474 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 FGFR4P22455 802 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 ASPRV1Q53RT3 343 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 BTBD6Q96KE9 485 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 CEP63Q96MT8 703 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 KCNQ5Q9NR82 932 aa22.2■■□□□ 1.14
SSBP3-216ENST00000610401 NHSL1Q5SYE7 1610 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 DOT1LQ8TEK3 1739 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 TISP43B9A030 160 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 MARCKSL1P49006 195 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 PPP2R2AP63151 447 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 THAP2Q9H0W7 228 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 VIMP08670 466 aaKnown RBP22.19■■□□□ 1.14
SSBP3-216ENST00000610401 KCNJ1P48048 391 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 IFI35P80217 286 aaPredicted RBP22.19■■□□□ 1.14
SSBP3-216ENST00000610401 VPS36Q86VN1 386 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 C18orf8Q96DM3 657 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 AMFRQ9UKV5 643 aa22.19■■□□□ 1.14
SSBP3-216ENST00000610401 FAM86B1E9PN63 330 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 FAM86B2P0C5J1 330 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 PNMA8AQ86V59 439 aaPredicted RBP22.18■■□□□ 1.14
SSBP3-216ENST00000610401 CNPY4Q8N129 248 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 LRRC57Q8N9N7 239 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 FMO2Q99518 471 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 ROBO1Q9Y6N7 1651 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 EIF4E1BA6NMX2 242 aaKnown RBP22.18■■□□□ 1.14
SSBP3-216ENST00000610401 PDE6BP35913 854 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 SLC12A3P55017 1021 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 ARHGAP4P98171 946 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 DRAP1Q14919 205 aaPredicted RBP22.18■■□□□ 1.14
SSBP3-216ENST00000610401 LNX1Q8TBB1 728 aaPredicted RBP22.18■■□□□ 1.14
SSBP3-216ENST00000610401 SCFD2Q8WU76 684 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms