RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 VCX3AQ9NNX9 186 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 TDRKHQ9Y2W6 561 aaKnown RBP12.9□□□□□ -0.34
CTCFL-217ENST00000608425 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 CASZ1Q86V15 1759 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 BAG3O95817 575 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 PYGMP11217 842 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 MCAMP43121 646 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
CTCFL-217ENST00000608425 ZNF362Q5T0B9 420 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-217ENST00000608425 UBAP2Q5T6F2 1119 aaKnown RBP12.9□□□□□ -0.34
CTCFL-217ENST00000608425 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 ZNF365Q70YC5 407 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 FAM13CQ8NE31 585 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 UHMK1Q8TAS1 419 aaKnown RBP12.9□□□□□ -0.34
CTCFL-217ENST00000608425 MGARPQ8TDB4 240 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 LPIN2Q92539 896 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 PAGE5Q96GU1 130 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 AGAP3Q96P47 875 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 WDR37Q9Y2I8 494 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 ZNF711Q9Y462 761 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 PCDHA13Q9Y5I0 950 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 A0A1B0GUL6 1792 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 F8VZ95 297 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 TJP3O95049 919 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 PRLRP16471 622 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 HOXD12P35452 270 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 ZNF131P52739 623 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 OXCT1P55809 520 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 TMED1Q13445 227 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 MEA1Q16626 185 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 NANOGNBQ7Z5D8 188 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 CLIP3Q96DZ5 547 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 ANKRD27Q96NW4 1050 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 PCDH18Q9HCL0 1135 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 DAAM1Q9Y4D1 1078 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 GMEB1Q9Y692 573 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 SIGLEC16A6NMB1 481 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 SEMA3EO15041 775 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 NVLO15381 856 aaKnown RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 TRIM21P19474 475 aaKnown RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 FGFR2P21802 821 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 PTPREP23469 700 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 TTLL12Q14166 644 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 NRG4Q8WWG1 115 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 TLCD1Q96CP7 247 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 INTS9Q9NV88 658 aaKnown RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 RGL2O15211 777 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 FOXP2O15409 715 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 PRC1O43663 620 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 ITGA2BP08514 1039 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 RTP1P59025 263 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 MGAT5Q09328 741 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 SPA17Q15506 151 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 IMMTQ16891 758 aaKnown RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 WDR60Q8WVS4 1066 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 CCDC42Q96M95 316 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 TIPINQ9BVW5 301 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
CTCFL-217ENST00000608425 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-217ENST00000608425 CLCN2P51788 898 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 ITPK1Q13572 414 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 WASHC4Q2M389 1173 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 CCDC92Q53HC0 331 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-217ENST00000608425 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 ARHGAP27Q6ZUM4 889 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 RBBP8NLQ8NC74 664 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-217ENST00000608425 DYDC2Q96IM9 177 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 IFT74Q96LB3 600 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 KRT23Q9C075 422 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 KCNJ14Q9UNX9 436 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 GDAQ9Y2T3 454 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 HEY1Q9Y5J3 304 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 DAPK3O43293 454 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 TOM1O60784 492 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-217ENST00000608425 ADD2P35612 726 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 PMS1P54277 932 aaKnown RBP12.88□□□□□ -0.35
CTCFL-217ENST00000608425 IGBP1P78318 339 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 UBE3CQ15386 1083 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 CCDC80Q76M96 950 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 PCMTD1Q96MG8 357 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-217ENST00000608425 CCDC113Q9H0I3 377 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 THAP9Q9H5L6 903 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 EFR3BQ9Y2G0 817 aa12.88□□□□□ -0.35
CTCFL-217ENST00000608425 ASLP04424 464 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 GSTA2P09210 222 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 CCDC166P0CW27 439 aa12.87□□□□□ -0.35
CTCFL-217ENST00000608425 GALK1P51570 392 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms