RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
LYSMD4-211ENST00000604213 ATP6V1G2O95670 118 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 SHBGP04278 402 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 CYP11B2P19099 503 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 NOVP48745 357 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 HOOK3Q86VS8 718 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 ATXN2LQ8WWM7 1075 aaKnown RBP16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 TRIM31Q9BZY9 425 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 ZDHHC18Q9NUE0 388 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 ARMCX3Q9UH62 379 aaPredicted RBP16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 KDM3AQ9Y4C1 1321 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 FRMD3A2A2Y4 597 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 ASAP2O43150 1006 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 FGGP02679 453 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 CHN1P15882 459 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 JAM2P57087 298 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 GSTO1P78417 241 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 UBE2SQ16763 222 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 PIGWQ7Z7B1 504 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 ADAM7Q9H2U9 754 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 SIX2Q9NPC8 291 aa16.6■□□□□ 0.25
LYSMD4-211ENST00000604213 NUDT17P0C025 328 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 CASP5P51878 434 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 PTENP60484 403 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 EPHA7Q15375 998 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 DUPD1Q68J44 220 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 BICDL1Q6ZP65 573 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 WDR66Q8TBY9 1149 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 NOD2Q9HC29 1040 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 SLC12A4Q9UP95 1085 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 GSTA1P08263 222 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 MMEP08473 750 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 MMP13P45452 471 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 ITIH4Q14624 930 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 ARSHQ5FYA8 562 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 HIBCHQ6NVY1 386 aaPredicted RBP16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 PGM2Q96G03 612 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 RAB17Q9H0T7 212 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 AMFRQ9UKV5 643 aa16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
LYSMD4-211ENST00000604213 POTEB3A0JP26 581 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 POTECB2RU33 542 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 DDX3YO15523 660 aaKnown RBP16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 MARCH6O60337 910 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 PPP1R7Q15435 360 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 DCAF12L1Q5VU92 463 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 POTEBQ6S5H4 581 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 VPS36Q86VN1 386 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 BANK1Q8NDB2 785 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 OLIG1Q8TAK6 271 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 U2AF1L4Q8WU68 220 aaKnown RBP16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 TRAF3IP3Q9Y228 551 aa16.58■□□□□ 0.25
LYSMD4-211ENST00000604213 KIF13BQ9NQT8 1826 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 HOXD13P35453 343 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 GALCP54803 685 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 KLRC3Q07444 240 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 CRYMQ14894 314 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 ANKS4BQ8N8V4 417 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 CUL5Q93034 780 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 RNF25Q96BH1 459 aaPredicted RBP16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 ERP44Q9BS26 406 aa16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 RTFDC1Q9BY42 306 aaPredicted RBP16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 PABPC3Q9H361 631 aaKnown RBP16.58■□□□□ 0.24
LYSMD4-211ENST00000604213 KDM4FA0A1W2PPD8 638 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 PMS2P54278 862 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 DR1Q01658 176 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 GJB7Q6PEY0 223 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 LRRC34Q8IZ02 419 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 SELENOSQ9BQE4 189 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 ZHX3Q9H4I2 956 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 OSGEPQ9NPF4 335 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 PPP1R9AQ9ULJ8 1098 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 PPP1R11O60927 126 aaPredicted RBP16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 XRCC5P13010 732 aaKnown RBP16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC12A3P55017 1021 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 ACCSLQ4AC99 568 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 CCDC63Q8NA47 563 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 SLC30A5Q8TAD4 765 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 LNX1Q8TBB1 728 aaPredicted RBP16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 UIMC1Q96RL1 719 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 BAIAP2L1Q9UHR4 511 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 NCANO14594 1321 aa16.57■□□□□ 0.24
LYSMD4-211ENST00000604213 PITPNM2Q9BZ72 1349 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 AKAP3O75969 853 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 KRT18P05783 430 aaKnown RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 LDHCP07864 332 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 COPB2P35606 906 aa16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 CLNS1AP54105 237 aaKnown RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 KNOP1Q1ED39 458 aaKnown RBP16.56■□□□□ 0.24
LYSMD4-211ENST00000604213 ASPRV1Q53RT3 343 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms