RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 GFOD2Q3B7J2 385 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 INTS6LQ5JSJ4 861 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 PERM1Q5SV97 790 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 C10orf62Q5T681 223 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 IER5Q5VY09 327 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 NXPE4Q6UWF7 544 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ARMCX2Q7L311 632 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 RTL10Q7L3V2 364 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ARL10Q8N8L6 244 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 KDF1Q8NAX2 398 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 PCSK9Q8NBP7 692 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 PHC3Q8NDX5 983 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 RIN3Q8TB24 985 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MFSD14AQ96MC6 490 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 POP1Q99575 1024 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MYD88Q99836 296 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 DDX23Q9BUQ8 820 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 OSBPL6Q9BZF3 934 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 EPN3Q9H201 632 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 SUDS3Q9H7L9 328 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 SLC5A4Q9NY91 659 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 INTUQ9ULD6 942 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TPX2Q9ULW0 747 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 VWA8A3KMH1 1905 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 WDR19Q8NEZ3 1342 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 KDM3AQ9Y4C1 1321 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MINDY4BA8MYZ0 360 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 UPK3BL1B0FP48 263 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 UPK3BL2E5RIL1 263 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TBX3O15119 743 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TFRCP02786 760 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 FOSL2P15408 326 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 INPP5BP32019 993 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ADD2P35612 726 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 HTR3AP46098 478 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ZNF165P49910 485 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 CHAF1AQ13111 956 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 CCDC85BQ15834 202 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 FNDC3BQ53EP0 1204 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 C9orf50Q5SZB4 431 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 SYCP2LQ5T4T6 812 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TAF3Q5VWG9 929 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 FBXL19Q6PCT2 694 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 PASD1Q8IV76 773 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ZNF687Q8N1G0 1237 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 FAM133AQ8N9E0 248 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 CHST13Q8NET6 341 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TTC8Q8TAM2 541 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MTMR8Q96EF0 704 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 NEUROD6Q96NK8 337 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 WNT8AQ9H1J5 351 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TDRD3Q9H7E2 651 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ZNF214Q9UL59 606 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ZBTB21Q9ULJ3 1066 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 YBX2Q9Y2T7 364 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 HRH3Q9Y5N1 445 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TP53BP1Q12888 1972 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ASTN1O14525 1302 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 A0A087X0B3 334 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TNPO2O14787 897 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 FOXD2O60548 495 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MICAL2O94851 1124 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MMP1P03956 469 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 VARSP26640 1264 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 HOXA6P31267 233 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 NEXNQ0ZGT2 675 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 KRT72Q14CN4 511 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ALX1Q15699 326 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 CT47A1Q5JQC4 288 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 SNAP47Q5SQN1 464 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ACBD5Q5T8D3 534 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TTC39BQ5VTQ0 682 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 NLRP8Q86W28 1048 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 RAVER1Q8IY67 606 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 AHI1Q8N157 1196 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 LSM14AQ8ND56 463 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 AFAP1L1Q8TED9 768 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 HDAC7Q8WUI4 952 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ATP6V1E2Q96A05 226 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 KIF2CQ99661 725 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 NOL10Q9BSC4 688 aaKnown RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 MXD3Q9BW11 206 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 TCP11L1Q9NUJ3 509 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 EVLQ9UI08 416 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-205ENST00000603679 CPA4Q9UI42 421 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 ZMYM5Q9UJ78 669 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 RABL2BQ9UNT1 228 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 WASF3Q9UPY6 502 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 SMCHD1A6NHR9 2005 aa3.35□□□□□ -1.87
VCAM1-205ENST00000603679 NOTCH4Q99466 2003 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 FLT1P17948 1338 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 DDTLA6NHG4 134 aaPredicted RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 TK2O00142 265 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 SNPHO15079 494 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 SNHG28P0DPA3 235 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 AKR1A1P14550 325 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 MYL6BP14649 208 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 NEK2P51955 445 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms