RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TTC12Q9H892 705 aaPredicted RBP18.8■□□□□ 0.6
SSBP4-213ENST00000602088 CDY2AQ9Y6F7 541 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 SIP14410 1827 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 MAGEB2O15479 319 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 P4HBP07237 508 aaKnown RBP18.79■□□□□ 0.6
SSBP4-213ENST00000602088 TXKP42681 527 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 QARSP47897 775 aaKnown RBP18.79■□□□□ 0.6
SSBP4-213ENST00000602088 KCNJ6P48051 423 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 MKRN4PQ13434 485 aaPredicted RBP18.79■□□□□ 0.6
SSBP4-213ENST00000602088 LPIN1Q14693 890 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 TARBP2Q15633 366 aaKnown RBP18.79■□□□□ 0.6
SSBP4-213ENST00000602088 ZNF174Q15697 407 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 FBXO47Q5MNV8 452 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 ZNF697Q5TEC3 545 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 NCAPH2Q6IBW4 605 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 SEPT8Q92599 483 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 MTMR10Q9NXD2 777 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 NOL7Q9UMY1 257 aaKnown RBP18.79■□□□□ 0.6
SSBP4-213ENST00000602088 SQORQ9Y6N5 450 aa18.79■□□□□ 0.6
SSBP4-213ENST00000602088 KDM3AQ9Y4C1 1321 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 TMEM265A0A087WTH1 108 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 DDX11L8A8MPP1 907 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 DKC1O60832 514 aaKnown RBP eCLIP18.78■□□□□ 0.6
SSBP4-213ENST00000602088 GHRP10912 638 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 TOB1P50616 345 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-213ENST00000602088 RAB30Q15771 203 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 TTC38Q5R3I4 469 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 LARP1BQ659C4 914 aaKnown RBP18.78■□□□□ 0.6
SSBP4-213ENST00000602088 METTL13Q8N6R0 699 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 APBB2Q92870 758 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 IFIH1Q9BYX4 1025 aaKnown RBP18.78■□□□□ 0.6
SSBP4-213ENST00000602088 CELF4Q9BZC1 486 aaKnown RBP18.78■□□□□ 0.6
SSBP4-213ENST00000602088 TTYH1Q9H313 450 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-213ENST00000602088 SEMA6BQ9H3T3 888 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 WRAP73Q9P2S5 460 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-213ENST00000602088 MSRAQ9UJ68 235 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 TRPV2Q9Y5S1 764 aa18.78■□□□□ 0.6
SSBP4-213ENST00000602088 CHD7Q9P2D1 2997 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 TMEM150BA6NC51 233 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 H3BQV1 296 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 M0QZ92 97 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 RABGGTBP53611 331 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 DEFB103AP81534 67 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 EFCAB12Q6NXP0 572 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 ANO5Q75V66 913 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 HERC6Q8IVU3 1022 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 LINC01465Q8N7H1 131 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 TIFAQ96CG3 184 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 DYDC2Q96IM9 177 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 CEP89Q96ST8 783 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 RGL1Q9NZL6 768 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 SEPT9Q9UHD8 586 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-213ENST00000602088 YBX2Q9Y2T7 364 aaKnown RBP18.77■□□□□ 0.6
SSBP4-213ENST00000602088 PCDHA11Q9Y5I1 949 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 GBF1Q92538 1859 aa18.77■□□□□ 0.6
SSBP4-213ENST00000602088 SLITRK3O94933 977 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 TBC1D8BQ0IIM8 1120 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 NBR1Q14596 966 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 MTERF2Q49AM1 385 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 TSHZ1Q6ZSZ6 1077 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 C4orf19Q8IY42 314 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 C4orf32Q8N8J7 132 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 FAM161BQ96MY7 647 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 HSD17B14Q9BPX1 270 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 EIF2AK1Q9BQI3 630 aaKnown RBP18.76■□□□□ 0.59
SSBP4-213ENST00000602088 SH2D3AQ9BRG2 576 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 LXNQ9BS40 222 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 CDHR5Q9HBB8 845 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 PTPRSQ13332 1948 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 MICAL3Q7RTP6 2002 aa18.76■□□□□ 0.59
SSBP4-213ENST00000602088 LOXHD1Q8IVV2 1947 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 VTNP04004 478 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 OR52Z1P0C646 297 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 MYOGP15173 224 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 TMOD1P28289 359 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 CLCN3P51790 818 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 CYP4A11Q02928 519 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSBP4-213ENST00000602088 LRRC71Q8N4P6 559 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 NKX2-4Q9H2Z4 354 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 ZSWIM4Q9H7M6 989 aa18.75■□□□□ 0.59
SSBP4-213ENST00000602088 AGO3Q9H9G7 860 aaKnown RBP18.75■□□□□ 0.59
SSBP4-213ENST00000602088 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 POTEMA6NI47 508 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 K7ELQ4 463 aaPredicted RBP18.74■□□□□ 0.59
SSBP4-213ENST00000602088 GPR32O75388 356 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 MAFO75444 373 aaPredicted RBP18.74■□□□□ 0.59
SSBP4-213ENST00000602088 CD52P31358 61 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 CTTNQ14247 550 aaKnown RBP18.74■□□□□ 0.59
SSBP4-213ENST00000602088 KIZQ2M2Z5 673 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 PLA2G4FQ68DD2 849 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 TMCO2Q7Z6W1 182 aaPredicted RBP18.74■□□□□ 0.59
SSBP4-213ENST00000602088 TPH2Q8IWU9 490 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 SNX21Q969T3 373 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
SSBP4-213ENST00000602088 MAP7D2Q96T17 732 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 ZNF576Q9H609 170 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms