RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 BADQ92934 168 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 RIT2Q99578 217 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 BCAS3Q9H6U6 928 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 LAMA2P24043 3122 aaKnown RBP12.86□□□□□ -0.35
ZNF548-211ENST00000600927 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
ZNF548-211ENST00000600927 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 FAM86B1E9PN63 330 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 TLR3O15455 904 aaKnown RBP12.85□□□□□ -0.35
ZNF548-211ENST00000600927 B4GALT4O60513 344 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 TIMP1P01033 207 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 FAM86B2P0C5J1 330 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 KCNA2P16389 499 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 PLCG1P19174 1290 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 NEDD9Q14511 834 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 NBPF20Q3BBV1 942 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 TMEM119Q4V9L6 283 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 COBLL1Q53SF7 1204 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 PRR16Q569H4 304 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 LUZP1Q86V48 1076 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 DHX40Q8IX18 779 aaKnown RBP12.85□□□□□ -0.35
ZNF548-211ENST00000600927 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 SPATA33Q96N06 139 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 POLR3CQ9BUI4 534 aaPredicted RBP12.85□□□□□ -0.35
ZNF548-211ENST00000600927 UBE2OQ9C0C9 1292 aaKnown RBP12.85□□□□□ -0.35
ZNF548-211ENST00000600927 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
ZNF548-211ENST00000600927 MSH4O15457 936 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 ATP9AO75110 1047 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 RHOBTB3O94955 611 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 TPM3P06753 285 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 RPA1P27694 616 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 CDC25AP30304 524 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 HOXC8P31273 242 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 AFMP43652 599 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 MYL5Q02045 173 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 GRB10Q13322 594 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 LRIT3Q3SXY7 679 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
ZNF548-211ENST00000600927 MFSD5Q6N075 450 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 PLA2G4DQ86XP0 818 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
ZNF548-211ENST00000600927 SLC5A5Q92911 643 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 CDHR1Q96JP9 859 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 GPR20Q99678 358 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 MTRQ99707 1265 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
ZNF548-211ENST00000600927 C16orf70Q9BSU1 422 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
ZNF548-211ENST00000600927 TRPV6Q9H1D0 765 aa12.84□□□□□ -0.35
ZNF548-211ENST00000600927 TRMT13Q9NUP7 481 aaKnown RBP12.84□□□□□ -0.35
ZNF548-211ENST00000600927 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 BIN1O00499 593 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 PSMD10O75832 226 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 ADCY5O95622 1261 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
ZNF548-211ENST00000600927 PRR29P0C7W0 189 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 ZNF286BP0CG31 522 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 RAG1P15918 1043 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 BMP6P22004 513 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 CDC25BP30305 580 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 EPHB4P54760 987 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 PSMD2Q13200 908 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 MTMR1Q13613 665 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
ZNF548-211ENST00000600927 FOXR2Q6PJQ5 311 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 CYFIP1Q7L576 1253 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 NEK9Q8TD19 979 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
ZNF548-211ENST00000600927 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.36
ZNF548-211ENST00000600927 MRFAP1L1Q96HT8 127 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 PNMA5Q96PV4 448 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 MLXIPQ9HAP2 919 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
ZNF548-211ENST00000600927 TBC1D22BQ9NU19 505 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 TELO2Q9Y4R8 837 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 UMODL1Q5DID0 1318 aa12.83□□□□□ -0.36
ZNF548-211ENST00000600927 DOCK5Q9H7D0 1870 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 SOX1O00570 391 aaPredicted RBP12.82□□□□□ -0.36
ZNF548-211ENST00000600927 LGALS2P05162 132 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 SUPT20HL2P0C7V6 817 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 CCT6AP40227 531 aaKnown RBP12.82□□□□□ -0.36
ZNF548-211ENST00000600927 PSEN2P49810 448 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 FPGSQ05932 587 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 RBL2Q08999 1139 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 MFSD10Q14728 455 aa12.82□□□□□ -0.36
ZNF548-211ENST00000600927 NCAPHQ15003 741 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms