RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ADAM2Q99965 735 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 DSCC1Q9BVC3 393 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 IL25Q9H293 177 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 CDHR5Q9HBB8 845 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 NOC2LQ9Y3T9 749 aaKnown RBP11.42□□□□□ -0.58
HIF3A-219ENST00000600879 DENND3A2RUS2 1198 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 RRN3P2A6NIE6 340 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 CA8P35219 290 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 MTMR1Q13613 665 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 UBE2SQ16763 222 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 DGLUCYQ7Z3D6 616 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 TICAM2Q86XR7 235 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 UBALD2Q8IYN6 164 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 GPRASP2Q96D09 838 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 CNTNAP3BQ96NU0 1288 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 MYL10Q9BUA6 226 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 CNTNAP3Q9BZ76 1288 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 CWH43Q9H720 699 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 SQORQ9Y6N5 450 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 R4GN57 208 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 GVINP1Q7Z2Y8 2422 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 FAM186AA6NE01 2351 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 DMXL1Q9Y485 3027 aa11.41□□□□□ -0.58
HIF3A-219ENST00000600879 DNAH14Q0VDD8 3507 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 RPS6KA5O75582 802 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 NUBP1P53384 320 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 TROAPQ12815 778 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 WTAPQ15007 396 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 ANGPT1Q15389 498 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 RARS2Q5T160 578 aaKnown RBP11.4□□□□□ -0.58
HIF3A-219ENST00000600879 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 TMEM184AQ6ZMB5 413 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 TMEM40Q8WWA1 233 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 MRPS27Q92552 414 aaKnown RBP11.4□□□□□ -0.58
HIF3A-219ENST00000600879 AZI2Q9H6S1 392 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 ERVK-5Q9HDB9 667 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 NR2E1Q9Y466 385 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 PCDHA2Q9Y5H9 948 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 TAF6LQ9Y6J9 622 aa11.4□□□□□ -0.58
HIF3A-219ENST00000600879 WDR87Q6ZQQ6 2873 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 LOXHD1Q8IVV2 1947 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 hCG_1642624A0A1W2PR95 340 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 ERICH2A1L162 156 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 FSD2A1L4K1 749 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 NPR3P17342 541 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 LAG3P18627 525 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 PDE4AP27815 886 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 TRDNQ13061 729 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 MCTP2Q6DN12 878 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 MTHFD1LQ6UB35 978 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 LRRC55Q6ZSA7 311 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 CMTR1Q8N1G2 835 aaKnown RBP11.39□□□□□ -0.59
HIF3A-219ENST00000600879 DCLK2Q8N568 766 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 AUTS2Q8WXX7 1259 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-219ENST00000600879 RRP36Q96EU6 259 aaKnown RBP11.39□□□□□ -0.59
HIF3A-219ENST00000600879 CDHR1Q96JP9 859 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 JPH1Q9HDC5 661 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-219ENST00000600879 SLC9A2Q9UBY0 812 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 SEC63Q9UGP8 760 aaKnown RBP11.39□□□□□ -0.59
HIF3A-219ENST00000600879 ST3GAL5Q9UNP4 418 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 HCFC2Q9Y5Z7 792 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 UBIAD1Q9Y5Z9 338 aa11.39□□□□□ -0.59
HIF3A-219ENST00000600879 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-219ENST00000600879 SMIM35A0A1B0GVV1 85 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 C9IYK1 514 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 PIK3CDO00329 1044 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 PLEKHA8P1O95397 391 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 RPLP2P05387 115 aaKnown RBP11.38□□□□□ -0.59
HIF3A-219ENST00000600879 KLRC1P26715 233 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 ACTR2P61160 394 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 NUCB1Q02818 461 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 PDE12Q6L8Q7 609 aaKnown RBP11.38□□□□□ -0.59
HIF3A-219ENST00000600879 CES5AQ6NT32 575 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 SLC24A5Q71RS6 500 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 PLEKHM2Q8IWE5 1019 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 TDRD5Q8NAT2 981 aaKnown RBP11.38□□□□□ -0.59
HIF3A-219ENST00000600879 RNF169Q8NCN4 708 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 CASP10Q92851 521 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 OSMRQ99650 979 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 HINFPQ9BQA5 517 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 ADAM7Q9H2U9 754 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 PSTPIP2Q9H939 334 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 RGS18Q9NS28 235 aa11.38□□□□□ -0.59
HIF3A-219ENST00000600879 PUF60Q9UHX1 559 aaKnown RBP11.38□□□□□ -0.59
HIF3A-219ENST00000600879 KDM3AQ9Y4C1 1321 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 DDX39AO00148 427 aaKnown RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 HIP1O00291 1037 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 NARSO43776 548 aaKnown RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 CLASP2O75122 1294 aaKnown RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 CYP21A2P08686 494 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 HOXB8P17481 243 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-219ENST00000600879 STAT5BP51692 787 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 CLCN5P51795 746 aa11.37□□□□□ -0.59
HIF3A-219ENST00000600879 KIZQ2M2Z5 673 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms