RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GABBR1Q9UBS5 961 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 PCDHA11Q9Y5I1 949 aa9.91□□□□□ -0.82
SSBP4-208ENST00000600628 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 BACH1O14867 736 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 CCNT1O60563 726 aaKnown RBP9.9□□□□□ -0.82
SSBP4-208ENST00000600628 GPR32O75388 356 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 LYPLA2O95372 231 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 OATP04181 439 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 KLRC1P26715 233 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 MRPS6P82932 125 aaKnown RBP9.9□□□□□ -0.82
SSBP4-208ENST00000600628 PRKCEQ02156 737 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 LPIN1Q14693 890 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 EPHA7Q15375 998 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 RAB30Q15771 203 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 ANO5Q75V66 913 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 MIER3Q7Z3K6 550 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 SLFN12Q8IYM2 578 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 SLC9A7Q96T83 725 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 ZNF576Q9H609 170 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 AGO3Q9H9G7 860 aaKnown RBP9.9□□□□□ -0.82
SSBP4-208ENST00000600628 RC3H2Q9HBD1 1191 aaKnown RBP9.9□□□□□ -0.82
SSBP4-208ENST00000600628 MSRAQ9UJ68 235 aa9.9□□□□□ -0.82
SSBP4-208ENST00000600628 YBX2Q9Y2T7 364 aaKnown RBP9.9□□□□□ -0.82
SSBP4-208ENST00000600628 NEMFO60524 1076 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 SLITRK3O94933 977 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 P4HBP07237 508 aaKnown RBP9.89□□□□□ -0.83
SSBP4-208ENST00000600628 ATP2A2P16615 1042 aaKnown RBP9.89□□□□□ -0.83
SSBP4-208ENST00000600628 RABGGTBP53611 331 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 DEFB103AP81534 67 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 HTRA4P83105 476 aaPredicted RBP9.89□□□□□ -0.83
SSBP4-208ENST00000600628 GUCY1B3Q02153 619 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 TRIM29Q14134 588 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 XKR3Q5GH77 459 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 HERC6Q8IVU3 1022 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 C4orf19Q8IY42 314 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 USP38Q8NB14 1042 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 LINC01599Q8WXQ3 324 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 APBB2Q92870 758 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 TRPC6Q9Y210 931 aa9.89□□□□□ -0.83
SSBP4-208ENST00000600628 FNDC1Q4ZHG4 1894 aaPredicted RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 MAGEB2O15479 319 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 MAFO75444 373 aaPredicted RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 GJB5O95377 273 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 CTSHP09668 335 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 GJB2P29033 226 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 QARSP47897 775 aaKnown RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 PSMC5P62195 406 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 IGBP1P78318 339 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 IKBKEQ14164 716 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 GRIN2CQ14957 1233 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 SAFBQ15424 915 aaKnown RBP eCLIP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 TSHZ1Q6ZSZ6 1077 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 RSPH3Q86UC2 560 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 RTN4RL1Q86UN2 441 aaPredicted RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 SP7Q8TDD2 431 aaPredicted RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 TMEM40Q8WWA1 233 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 TOP1MTQ969P6 601 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 SNX21Q969T3 373 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 INTS4Q96HW7 963 aaKnown RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 IFIH1Q9BYX4 1025 aaKnown RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 CELF4Q9BZC1 486 aaKnown RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 ADAMTS10Q9H324 1103 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 TMX1Q9H3N1 280 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 DHX33Q9H6R0 707 aaKnown RBP9.88□□□□□ -0.83
SSBP4-208ENST00000600628 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 NRBP2Q9NSY0 501 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 PCDHA12Q9UN75 941 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 CEP131Q9UPN4 1083 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 PPME1Q9Y570 386 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 CDY2AQ9Y6F7 541 aa9.88□□□□□ -0.83
SSBP4-208ENST00000600628 RALGAPA2Q2PPJ7 1873 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 NLRC5Q86WI3 1866 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 PRRC2BQ5JSZ5 2229 aaKnown RBP9.87□□□□□ -0.83
SSBP4-208ENST00000600628 TMEM150BA6NC51 233 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 ENPP3O14638 875 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 CHMP2AO43633 222 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 LINC00271P0C7V0 271 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 MYOGP15173 224 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 POU3F3P20264 500 aaPredicted RBP9.87□□□□□ -0.83
SSBP4-208ENST00000600628 DSC3Q14574 896 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 IER5Q5VY09 327 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
SSBP4-208ENST00000600628 IGSF22Q8N9C0 903 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 ZNF579Q8NAF0 562 aaKnown RBP9.87□□□□□ -0.83
SSBP4-208ENST00000600628 BANK1Q8NDB2 785 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 MYLIPQ8WY64 445 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 SEPT8Q92599 483 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 LXNQ9BS40 222 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
SSBP4-208ENST00000600628 NKX2-4Q9H2Z4 354 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 TTC12Q9H892 705 aaPredicted RBP9.87□□□□□ -0.83
SSBP4-208ENST00000600628 SLC28A3Q9HAS3 691 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 ERVK-5Q9HDB9 667 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
SSBP4-208ENST00000600628 RGL1Q9NZL6 768 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 PADI3Q9ULW8 664 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 KIF3AQ9Y496 699 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms