RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 RARRES1P49788 294 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 KRT83P78385 493 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 PLS1Q14651 629 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 DCAF17Q5H9S7 520 aaPredicted RBP15.91■□□□□ 0.14
VRK3-217ENST00000599538 UTP14CQ5TAP6 766 aaKnown RBP15.91■□□□□ 0.14
VRK3-217ENST00000599538 FRMD5Q7Z6J6 570 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 KIAA1328Q86T90 577 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 JAKMIP2Q96AA8 810 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 IQCDQ96DY2 449 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 FAM184BQ9ULE4 1060 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 C19orf81C9J6K1 198 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 ENC1O14682 589 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 EIF3DO15371 548 aaKnown RBP eCLIP15.91■□□□□ 0.14
VRK3-217ENST00000599538 RGS20O76081 388 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 GUCY2CP25092 1073 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 KIF11P52732 1056 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.91■□□□□ 0.14
VRK3-217ENST00000599538 UBXN4Q92575 508 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 GANQ9H2C0 597 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 CEP72Q9P209 647 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 ODF2LQ9ULJ1 636 aa15.91■□□□□ 0.14
VRK3-217ENST00000599538 SPDYE16A6NNV3 312 aaPredicted RBP15.9■□□□□ 0.14
VRK3-217ENST00000599538 NR3C2P08235 984 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 FDX1P10109 184 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 QARSP47897 775 aaKnown RBP15.9■□□□□ 0.14
VRK3-217ENST00000599538 VSIG10LQ86VR7 867 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 NEK9Q8TD19 979 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 SLC35C1Q96A29 364 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 BORCS6Q96GS4 357 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 NAPGQ99747 312 aaPredicted RBP15.9■□□□□ 0.14
VRK3-217ENST00000599538 FHDC1Q9C0D6 1143 aaPredicted RBP15.9■□□□□ 0.14
VRK3-217ENST00000599538 CGNQ9P2M7 1197 aaKnown RBP15.9■□□□□ 0.14
VRK3-217ENST00000599538 HDAC6Q9UBN7 1215 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 PUF60Q9UHX1 559 aaKnown RBP15.9■□□□□ 0.14
VRK3-217ENST00000599538 SNCAIPQ9Y6H5 919 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
VRK3-217ENST00000599538 EFCAB8A8MWE9 144 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 ADM5C9JUS6 153 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 USO1O60763 962 aaKnown RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 VGLL4Q14135 290 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 ASTE1Q2TB18 679 aaPredicted RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 TCERG1LQ5VWI1 586 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 SAMD3Q8N6K7 520 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 A1CFQ9NQ94 594 aaKnown RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 TBC1D22BQ9NU19 505 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 KCND2Q9NZV8 630 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 MYO1AQ9UBC5 1043 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 CDC23Q9UJX2 597 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 DOCK5Q9H7D0 1870 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 MACROD2A1Z1Q3 448 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 TISP43B9A030 160 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 SORBS3O60504 671 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 AFPP02771 609 aaKnown RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 YWHABP31946 246 aaKnown RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 VAV2P52735 878 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 NPEPPSP55786 919 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 AMPD2Q01433 879 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 GFPT1Q06210 699 aaPredicted RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 NOL9Q5SY16 702 aaKnown RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 TREML2Q5T2D2 321 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 PLA2G4FQ68DD2 849 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 RSRC2Q7L4I2 434 aaKnown RBP15.89■□□□□ 0.13
VRK3-217ENST00000599538 STRA6Q9BX79 667 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 EDEM3Q9BZQ6 932 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 GPRC5CQ9NQ84 441 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 CYP39A1Q9NYL5 469 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 SEL1LQ9UBV2 794 aa15.89■□□□□ 0.13
VRK3-217ENST00000599538 BACH1O14867 736 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 PPP1R37O75864 691 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 RPL13P26373 211 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 ARID5AQ03989 594 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 TEX35Q5T0J7 233 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 ZNF662Q6ZS27 426 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 DEF6Q9H4E7 631 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 AGPAT3Q9NRZ7 376 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 TMOD4Q9NZQ9 345 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 AJAP1Q9UKB5 411 aaPredicted RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 PCDHA13Q9Y5I0 950 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 PPP2R3BQ9Y5P8 575 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 WDR90Q96KV7 1748 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 KRT86O43790 486 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 AKR1B10O60218 316 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 IPO7O95373 1038 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 LCA5LO95447 670 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 ATP1A1P05023 1023 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 EPB41P11171 864 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 H2AFXP16104 143 aaPredicted RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 ZSCAN20P17040 1043 aaPredicted RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 PON1P27169 355 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 CYP2J2P51589 502 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 FSTL1Q12841 308 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 ENOX2Q16206 610 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 SUPT20HL1Q3ZLR7 823 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 TDRD12Q587J7 1177 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 TEX13BQ9BXU2 312 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 IFIH1Q9BYX4 1025 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 ZNF446Q9NWS9 450 aa15.88■□□□□ 0.13
VRK3-217ENST00000599538 DBR1Q9UK59 544 aaKnown RBP15.88■□□□□ 0.13
VRK3-217ENST00000599538 LOXHD1Q8IVV2 1947 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms