RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PCDHB7Q9Y5E2 793 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 CSPG5O95196 566 aa24.08■■□□□ 1.45
PNKP-212ENST00000599454 CCNE2O96020 404 aa24.08■■□□□ 1.45
PNKP-212ENST00000599454 IRX6P78412 446 aaPredicted RBP24.08■■□□□ 1.45
PNKP-212ENST00000599454 UBE3AQ05086 875 aa24.08■■□□□ 1.45
PNKP-212ENST00000599454 NFX1Q12986 1120 aaKnown RBP24.08■■□□□ 1.45
PNKP-212ENST00000599454 HERC4Q5GLZ8 1057 aaPredicted RBP24.08■■□□□ 1.45
PNKP-212ENST00000599454 ZNF484Q5JVG2 852 aa24.08■■□□□ 1.45
PNKP-212ENST00000599454 ZNF302Q9NR11 478 aa24.08■■□□□ 1.45
PNKP-212ENST00000599454 AAASQ9NRG9 546 aa24.08■■□□□ 1.45
PNKP-212ENST00000599454 FSD2A1L4K1 749 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 RPS6KA5O75582 802 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 COASYQ13057 564 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 TMEM266Q2M3C6 531 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 TSGA10IPQ3SY00 556 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 MIS18BP1Q6P0N0 1132 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 RGS18Q9NS28 235 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 BRPF3Q9ULD4 1205 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 PCDHB12Q9Y5F1 795 aa24.07■■□□□ 1.44
PNKP-212ENST00000599454 DENND3A2RUS2 1198 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 GOLGA8AA7E2F4 631 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 GOLGA8BA8MQT2 603 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 DDX39AO00148 427 aaKnown RBP24.06■■□□□ 1.44
PNKP-212ENST00000599454 GPR182O15218 404 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 KRT32Q14532 448 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 BMP2KLQ5H9B9 411 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 MCTP2Q6DN12 878 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 PDXDC2PQ6P474 469 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 SLC24A5Q71RS6 500 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 PLA2G4DQ86XP0 818 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 CCDC60Q8IWA6 550 aaPredicted RBP24.06■■□□□ 1.44
PNKP-212ENST00000599454 KIAA0319LQ8IZA0 1049 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 TMEM260Q9NX78 707 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 GINS2Q9Y248 185 aa24.06■■□□□ 1.44
PNKP-212ENST00000599454 NOC2LQ9Y3T9 749 aaKnown RBP24.06■■□□□ 1.44
PNKP-212ENST00000599454 FAM86B1E9PN63 330 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 CYP3A4P08684 503 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 FAM86B2P0C5J1 330 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 ADGRD2Q7Z7M1 963 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 RNF135Q8IUD6 432 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 SMRP1Q8NCR6 262 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 MFSD14AQ96MC6 490 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 CLEC1BQ9P126 229 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 MUTYHQ9UIF7 546 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 C5orf42Q9H799 3197 aa24.05■■□□□ 1.44
PNKP-212ENST00000599454 ESYT2A0FGR8 921 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 IPO5O00410 1097 aaKnown RBP24.04■■□□□ 1.44
PNKP-212ENST00000599454 DHX15O43143 795 aaKnown RBP24.04■■□□□ 1.44
PNKP-212ENST00000599454 NRIP1P48552 1158 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 GATMP50440 423 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 SETQ01105 290 aaPredicted RBP24.04■■□□□ 1.44
PNKP-212ENST00000599454 SPOUT1Q5T280 376 aaKnown RBP24.04■■□□□ 1.44
PNKP-212ENST00000599454 CRYGNQ8WXF5 182 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 BBXQ8WY36 941 aaPredicted RBP24.04■■□□□ 1.44
PNKP-212ENST00000599454 TCEANC2Q96MN5 208 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 ADAM2Q99965 735 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 TBC1D22BQ9NU19 505 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 ST3GAL5Q9UNP4 418 aa24.04■■□□□ 1.44
PNKP-212ENST00000599454 IGLV3-22A0A075B6J6 115 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 KLF18A0A0U1RQI7 1052 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 CCDC196A0A1B0GTZ2 297 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 C9IYK1 514 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 MGEA5O60502 916 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 HMGB1P09429 215 aaKnown RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 CRYBB1P53674 252 aaPredicted RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 PFKFB3Q16875 520 aaPredicted RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 JAKMIP3Q5VZ66 844 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 PDE12Q6L8Q7 609 aaKnown RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 ZNF746Q6NUN9 644 aaPredicted RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 SWSAP1Q6NVH7 229 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 CCDC12Q8WUD4 166 aaPredicted RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 TMEM40Q8WWA1 233 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 CDCA3Q99618 268 aaPredicted RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 CDHR5Q9HBB8 845 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 TLR9Q9NR96 1032 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 FAM217BQ9NTX9 383 aaPredicted RBP24.03■■□□□ 1.44
PNKP-212ENST00000599454 TCEAL9Q9UHQ7 104 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 CEP131Q9UPN4 1083 aa24.03■■□□□ 1.44
PNKP-212ENST00000599454 TBKBP1A7MCY6 615 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 ZBTB42B2RXF5 422 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 HFE2Q6ZVN8 426 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 CKAP2LQ8IYA6 745 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 SMAP1Q8IYB5 467 aaPredicted RBP24.02■■□□□ 1.44
PNKP-212ENST00000599454 EDAQ92838 391 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 ZNF577Q9BSK1 485 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 ELAC1Q9H777 363 aaKnown RBP24.02■■□□□ 1.44
PNKP-212ENST00000599454 TLE6Q9H808 572 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 TMEM161AQ9NX61 479 aa24.02■■□□□ 1.44
PNKP-212ENST00000599454 MAFBQ9Y5Q3 323 aaPredicted RBP24.02■■□□□ 1.44
PNKP-212ENST00000599454 C22orf31O95567 290 aa24.01■■□□□ 1.43
PNKP-212ENST00000599454 GLP2RO95838 553 aa24.01■■□□□ 1.43
PNKP-212ENST00000599454 ATP4AP20648 1035 aa24.01■■□□□ 1.43
PNKP-212ENST00000599454 IBSPP21815 317 aaPredicted RBP24.01■■□□□ 1.43
PNKP-212ENST00000599454 CDC27P30260 824 aa24.01■■□□□ 1.43
PNKP-212ENST00000599454 RBM23Q86U06 439 aaKnown RBP24.01■■□□□ 1.43
PNKP-212ENST00000599454 ALYREFQ86V81 257 aaKnown RBP24.01■■□□□ 1.43
PNKP-212ENST00000599454 ZNF710Q8N1W2 664 aa24.01■■□□□ 1.43
PNKP-212ENST00000599454 MICAL1Q8TDZ2 1067 aa24.01■■□□□ 1.43
PNKP-212ENST00000599454 ZMYND12Q9H0C1 365 aa24.01■■□□□ 1.43
PNKP-212ENST00000599454 ATP6V0A4Q9HBG4 840 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms