RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 RAD9AQ99638 391 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 SH2B1Q9NRF2 756 aaPredicted RBP25.47■■□□□ 1.67
CCDC9-204ENST00000599398 NRBP2Q9NSY0 501 aa25.47■■□□□ 1.67
CCDC9-204ENST00000599398 LCHNA4D1U4 455 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 ZNF862O60290 1169 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 ARHGEF15O94989 841 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 OATP04181 439 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 IGFBP4P22692 258 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 TAP1Q03518 808 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 DIS3L2Q8IYB7 885 aaKnown RBP25.46■■□□□ 1.67
CCDC9-204ENST00000599398 METTL13Q8N6R0 699 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 LLPHQ9BRT6 129 aaKnown RBP25.46■■□□□ 1.67
CCDC9-204ENST00000599398 CELF4Q9BZC1 486 aaKnown RBP25.46■■□□□ 1.67
CCDC9-204ENST00000599398 GINS2Q9Y248 185 aa25.46■■□□□ 1.67
CCDC9-204ENST00000599398 BTBD18B2RXH4 712 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 UPP2O95045 317 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 C22orf31O95567 290 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 GUCY1B3Q02153 619 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 RABEP1Q15276 862 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 TNFRSF25Q93038 417 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 FAM20AQ96MK3 541 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 KCNMB3Q9NPA1 279 aa25.45■■□□□ 1.66
CCDC9-204ENST00000599398 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.44■■□□□ 1.66
CCDC9-204ENST00000599398 CD52P31358 61 aa25.44■■□□□ 1.66
CCDC9-204ENST00000599398 POTEDQ86YR6 584 aa25.44■■□□□ 1.66
CCDC9-204ENST00000599398 KIAA0319LQ8IZA0 1049 aa25.44■■□□□ 1.66
CCDC9-204ENST00000599398 ARNTL2Q8WYA1 636 aa25.44■■□□□ 1.66
CCDC9-204ENST00000599398 AGO3Q9H9G7 860 aaKnown RBP25.44■■□□□ 1.66
CCDC9-204ENST00000599398 PRUNE2Q8WUY3 3088 aa25.44■■□□□ 1.66
CCDC9-204ENST00000599398 ADGRE1Q14246 886 aa25.43■■□□□ 1.66
CCDC9-204ENST00000599398 SAFBQ15424 915 aaKnown RBP eCLIP25.43■■□□□ 1.66
CCDC9-204ENST00000599398 B3GNT9Q6UX72 402 aa25.43■■□□□ 1.66
CCDC9-204ENST00000599398 USP38Q8NB14 1042 aa25.43■■□□□ 1.66
CCDC9-204ENST00000599398 C8orf76Q96K31 380 aa25.43■■□□□ 1.66
CCDC9-204ENST00000599398 PPP1R16BQ96T49 567 aa25.43■■□□□ 1.66
CCDC9-204ENST00000599398 INSL6Q9Y581 213 aa25.43■■□□□ 1.66
CCDC9-204ENST00000599398 SQORQ9Y6N5 450 aa25.43■■□□□ 1.66
CCDC9-204ENST00000599398 RFXAPO00287 272 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 TBX3O15119 743 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 MAGEB2O15479 319 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 ST18O60284 1047 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 HMGN5P82970 282 aaKnown RBP25.42■■□□□ 1.66
CCDC9-204ENST00000599398 PAK2Q13177 524 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 FAM184AQ8NB25 1140 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 BANK1Q8NDB2 785 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 PPM1EQ8WY54 764 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 TOP1MTQ969P6 601 aa25.42■■□□□ 1.66
CCDC9-204ENST00000599398 SEPT9Q9UHD8 586 aaPredicted RBP25.42■■□□□ 1.66
CCDC9-204ENST00000599398 KDM3AQ9Y4C1 1321 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 BAG4O95429 457 aaKnown RBP25.41■■□□□ 1.66
CCDC9-204ENST00000599398 VTNP04004 478 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 CLCN3P51790 818 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 PPP2R5CQ13362 524 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 EFCAB12Q6NXP0 572 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 SPRED2Q7Z698 418 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 HAS1Q92839 578 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 YME1L1Q96TA2 773 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 VAV3Q9UKW4 847 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 MTUS1Q9ULD2 1270 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 PADI3Q9ULW8 664 aa25.41■■□□□ 1.66
CCDC9-204ENST00000599398 EML1O00423 815 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 TMOD1P28289 359 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 TMEM266Q2M3C6 531 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 MTERF2Q49AM1 385 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 XKR3Q5GH77 459 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 SLFN12Q8IYM2 578 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 LRRC71Q8N4P6 559 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 MAP7D2Q96T17 732 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 AKT3Q9Y243 479 aa25.4■■□□□ 1.66
CCDC9-204ENST00000599398 LINC01553A4QN01 128 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 EPOPA6NHQ4 379 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 ENPP3O14638 875 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 PSMC5P62195 406 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 HTRA4P83105 476 aaPredicted RBP25.39■■□□□ 1.66
CCDC9-204ENST00000599398 TBC1D8BQ0IIM8 1120 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 NFX1Q12986 1120 aaKnown RBP25.39■■□□□ 1.66
CCDC9-204ENST00000599398 KIZQ2M2Z5 673 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 MICALL1Q8N3F8 863 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 TGS1Q96RS0 853 aaKnown RBP25.39■■□□□ 1.66
CCDC9-204ENST00000599398 FTHL17Q9BXU8 183 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 SUGCTQ9HAC7 445 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 CDHR5Q9HBB8 845 aa25.39■■□□□ 1.66
CCDC9-204ENST00000599398 TMEM150BA6NC51 233 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 DDX11L8A8MPP1 907 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 RPS6KA5O75582 802 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 ATP2B1P20020 1258 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 CCDC85BQ15834 202 aaPredicted RBP25.38■■□□□ 1.65
CCDC9-204ENST00000599398 CALCRLQ16602 461 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 NCAPH2Q6IBW4 605 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 OSMRQ99650 979 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 SH2D3AQ9BRG2 576 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 UNC80Q8N2C7 3258 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 TRANK1O15050 2925 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 A0A0C4DFX4 3053 aa25.38■■□□□ 1.65
CCDC9-204ENST00000599398 TTC3P53804 2025 aa25.37■■□□□ 1.65
CCDC9-204ENST00000599398 QARSP47897 775 aaKnown RBP25.37■■□□□ 1.65
CCDC9-204ENST00000599398 GNL2Q13823 731 aaKnown RBP25.37■■□□□ 1.65
CCDC9-204ENST00000599398 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.37■■□□□ 1.65
CCDC9-204ENST00000599398 TMEM40Q8WWA1 233 aa25.37■■□□□ 1.65
CCDC9-204ENST00000599398 NIFKQ9BYG3 293 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms