RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PUS10Q3MIT2 529 aaKnown RBP16.7■□□□□ 0.26
IRF3-223ENST00000599223 CENPQQ7L2Z9 268 aaPredicted RBP16.7■□□□□ 0.26
IRF3-223ENST00000599223 PLA2G4DQ86XP0 818 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 KIAA0319LQ8IZA0 1049 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 FTHL17Q9BXU8 183 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
IRF3-223ENST00000599223 GINS2Q9Y248 185 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 HCN4Q9Y3Q4 1203 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 ZNF318Q5VUA4 2279 aa16.7■□□□□ 0.26
IRF3-223ENST00000599223 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
IRF3-223ENST00000599223 PPFIA3O75145 1194 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 C22orf31O95567 290 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 ZNF76P36508 570 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 SLC26A2P50443 739 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
IRF3-223ENST00000599223 PKN1Q16512 942 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 RASGRP4Q8TDF6 673 aa16.69■□□□□ 0.26
IRF3-223ENST00000599223 NOC2LQ9Y3T9 749 aaKnown RBP16.69■□□□□ 0.26
IRF3-223ENST00000599223 COL1A2P08123 1366 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 ESYT2A0FGR8 921 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 MBTPS2O43462 519 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 HBP1O60381 514 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 CYP3A4P08684 503 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 NFX1Q12986 1120 aaKnown RBP16.68■□□□□ 0.26
IRF3-223ENST00000599223 KRT32Q14532 448 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 SMAD2Q15796 467 aaKnown RBP16.68■□□□□ 0.26
IRF3-223ENST00000599223 PDXDC2PQ6P474 469 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 Q6ZUG5 572 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 ADHFE1Q8IWW8 467 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 SPPL3Q8TCT6 385 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 KCNB2Q92953 911 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 BRF1Q92994 677 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 P2RX5Q93086 422 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 LENG9Q96B70 501 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 JAKMIP1Q96N16 626 aaKnown RBP16.68■□□□□ 0.26
IRF3-223ENST00000599223 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 IGFLR1Q9H665 355 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 ZNF302Q9NR11 478 aa16.68■□□□□ 0.26
IRF3-223ENST00000599223 TECTAO75443 2155 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 EDIL3O43854 480 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 GLP2RO95838 553 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 SARSP49591 514 aaKnown RBP16.67■□□□□ 0.26
IRF3-223ENST00000599223 KIZQ2M2Z5 673 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 FAM160B1Q5W0V3 765 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 SWSAP1Q6NVH7 229 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 FAM228AQ86W67 206 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 REXO1Q8N1G1 1221 aaKnown RBP16.67■□□□□ 0.26
IRF3-223ENST00000599223 PHKBQ93100 1093 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 OSMRQ99650 979 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 GLT8D2Q9H1C3 349 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 PRKAG3Q9UGI9 489 aa16.67■□□□□ 0.26
IRF3-223ENST00000599223 PRR33A8MZF0 331 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 DCXO43602 365 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 RPS6KA5O75582 802 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 VTNP04004 478 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 STAG3L1P0CL83 205 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 SMAD4Q13485 552 aaKnown RBP16.66■□□□□ 0.26
IRF3-223ENST00000599223 MIS18BP1Q6P0N0 1132 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 TRMT1LQ7Z2T5 733 aaKnown RBP16.66■□□□□ 0.26
IRF3-223ENST00000599223 NME8Q8N427 588 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 POF1BQ8WVV4 589 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
IRF3-223ENST00000599223 MSLNLQ96KJ4 702 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 ADAM2Q99965 735 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 ZNF577Q9BSK1 485 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 CLEC1BQ9P126 229 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 ST3GAL5Q9UNP4 418 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 MAFBQ9Y5Q3 323 aaPredicted RBP16.66■□□□□ 0.26
IRF3-223ENST00000599223 SNX14Q9Y5W7 946 aa16.66■□□□□ 0.26
IRF3-223ENST00000599223 PIEZO1Q92508 2521 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 C9IYK1 514 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 NCK2O43639 380 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
IRF3-223ENST00000599223 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
IRF3-223ENST00000599223 HSPA4P34932 840 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 CLCN3P51790 818 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
IRF3-223ENST00000599223 SETQ01105 290 aaPredicted RBP16.65■□□□□ 0.26
IRF3-223ENST00000599223 ADAM15Q13444 863 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 NTRK3Q16288 839 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 PRR16Q569H4 304 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 ZNF484Q5JVG2 852 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 ZNF746Q6NUN9 644 aaPredicted RBP16.65■□□□□ 0.26
IRF3-223ENST00000599223 CD207Q9UJ71 328 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 LRFN2Q9ULH4 789 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 FAM50BQ9Y247 325 aa16.65■□□□□ 0.26
IRF3-223ENST00000599223 ARIH1Q9Y4X5 557 aaPredicted RBP16.65■□□□□ 0.26
IRF3-223ENST00000599223 TBKBP1A7MCY6 615 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 GPR32O75388 356 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 FGFR1P11362 822 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 ALADP13716 330 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 NRIP1P48552 1158 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 NDUFV1P49821 464 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 FGD1P98174 961 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 UGCGQ16739 394 aa16.64■□□□□ 0.25
IRF3-223ENST00000599223 NAALADL2Q58DX5 795 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms