RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 LRRC27Q9C0I9 530 aa23.27■■□□□ 1.32
COPE-208ENST00000598969 LOXHD1Q8IVV2 1947 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 NPHP3-ACAD11A0A0J9YXS1 232 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 ARHGEF35A5YM69 484 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 HSPA1AP0DMV8 641 aaKnown RBP23.26■■□□□ 1.31
COPE-208ENST00000598969 HSPA1BP0DMV9 641 aaKnown RBP23.26■■□□□ 1.31
COPE-208ENST00000598969 GJA9P57773 515 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 DGKDQ16760 1214 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 C1orf186Q6ZWK4 172 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 DYMQ7RTS9 669 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 UPF3AQ9H1J1 476 aaKnown RBP23.26■■□□□ 1.31
COPE-208ENST00000598969 CBX8Q9HC52 389 aa23.26■■□□□ 1.31
COPE-208ENST00000598969 SEPT9Q9UHD8 586 aaPredicted RBP23.26■■□□□ 1.31
COPE-208ENST00000598969 BIN1O00499 593 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 ZNF286BP0CG31 522 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 MARK3P27448 753 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 PLCB4Q15147 1175 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 XKR9Q5GH70 373 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 OTUD6AQ7L8S5 288 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 TRIML1Q8N9V2 468 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 SH3TC2Q8TF17 1288 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 MAN1B1Q9UKM7 699 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 SYNRGQ9UMZ2 1314 aa23.25■■□□□ 1.31
COPE-208ENST00000598969 MYADML2A6NDP7 307 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 RPN1P04843 607 aaKnown RBP23.24■■□□□ 1.31
COPE-208ENST00000598969 RARBP10826 455 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 SLC26A2P50443 739 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 ASIC1P78348 528 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 NKX3-2P78367 333 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 BEX3Q00994 111 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 PADI6Q6TGC4 694 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 GSDMAQ96QA5 445 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 NIFKQ9BYG3 293 aaKnown RBP23.24■■□□□ 1.31
COPE-208ENST00000598969 CPT1AP50416 773 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 LBX1P52954 281 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 GIT2Q14161 759 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 FSCN1Q16658 493 aaKnown RBP23.24■■□□□ 1.31
COPE-208ENST00000598969 ATP8B4Q8TF62 1192 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 FAM167AQ96KS9 214 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 CEP170P1Q96L14 293 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 CEP89Q96ST8 783 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 NRBP2Q9NSY0 501 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 ERAP1Q9NZ08 941 aa23.24■■□□□ 1.31
COPE-208ENST00000598969 DDX20Q9UHI6 824 aaKnown RBP23.24■■□□□ 1.31
COPE-208ENST00000598969 CENPFP49454 3210 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 PGK1P00558 417 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 CACNB1Q02641 598 aaPredicted RBP23.23■■□□□ 1.31
COPE-208ENST00000598969 RAD51AP2Q09MP3 1159 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 DPCR1Q3MIW9 517 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 ISM2Q6H9L7 571 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 C11orf57Q6ZUT1 292 aaPredicted RBP23.23■■□□□ 1.31
COPE-208ENST00000598969 LUZP1Q86V48 1076 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 RNPEPQ9H4A4 650 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 CYP26B1Q9NR63 512 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 ARID2Q68CP9 1835 aa23.23■■□□□ 1.31
COPE-208ENST00000598969 GOLGA6L19H0YKK7 550 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 ADAMTS4O75173 837 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 BMP6P22004 513 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 CTCFP49711 727 aaPredicted RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 TARBP2Q15633 366 aaKnown RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 KMT5BQ4FZB7 885 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 UNC13DQ70J99 1090 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 BBXQ8WY36 941 aaPredicted RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 CCDC43Q96MW1 224 aaKnown RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 BPIFA3Q9BQP9 254 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 REEP2Q9BRK0 252 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 BMP2KQ9NSY1 1161 aaPredicted RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 KCND2Q9NZV8 630 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 BECN2A8MW95 431 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 H3BRB1 525 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 C6orf222P0C671 652 aaPredicted RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 GUCY2CP25092 1073 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 CCDC173Q0VFZ6 552 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 MORC3Q14149 939 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 MTERF2Q49AM1 385 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 CTU1Q7Z7A3 348 aaKnown RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 KAT2BQ92831 832 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 TUT1Q9H6E5 874 aaKnown RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 HMX1Q9NP08 348 aaPredicted RBP23.22■■□□□ 1.31
COPE-208ENST00000598969 XPNPEP3Q9NQH7 507 aa23.22■■□□□ 1.31
COPE-208ENST00000598969 PVALEFA0A1B0GWK0 134 aa23.21■■□□□ 1.31
COPE-208ENST00000598969 ZBTB42B2RXF5 422 aa23.21■■□□□ 1.31
COPE-208ENST00000598969 USO1O60763 962 aaKnown RBP23.21■■□□□ 1.31
COPE-208ENST00000598969 KRT18P05783 430 aaKnown RBP23.21■■□□□ 1.31
COPE-208ENST00000598969 KCNB1Q14721 858 aa23.21■■□□□ 1.31
COPE-208ENST00000598969 BRDTQ58F21 947 aaPredicted RBP23.21■■□□□ 1.31
COPE-208ENST00000598969 POLD4Q9HCU8 107 aa23.21■■□□□ 1.31
COPE-208ENST00000598969 PDLIM7Q9NR12 457 aa23.21■■□□□ 1.31
COPE-208ENST00000598969 DACH1Q9UI36 760 aa23.21■■□□□ 1.31
COPE-208ENST00000598969 ZNF215Q9UL58 517 aaPredicted RBP23.21■■□□□ 1.31
COPE-208ENST00000598969 FRMD3A2A2Y4 597 aa23.2■■□□□ 1.3
COPE-208ENST00000598969 RSPH10B2B2RC85 870 aa23.2■■□□□ 1.3
COPE-208ENST00000598969 F2P00734 622 aa23.2■■□□□ 1.3
COPE-208ENST00000598969 RSPH10BP0C881 870 aa23.2■■□□□ 1.3
COPE-208ENST00000598969 IDEP14735 1019 aa23.2■■□□□ 1.3
COPE-208ENST00000598969 HBP1O60381 514 aa23.19■■□□□ 1.3
COPE-208ENST00000598969 RHOBTB3O94955 611 aa23.19■■□□□ 1.3
COPE-208ENST00000598969 MYL3P08590 195 aa23.19■■□□□ 1.3
COPE-208ENST00000598969 EHHADHQ08426 723 aa23.19■■□□□ 1.3
COPE-208ENST00000598969 MAPK7Q13164 816 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms