RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 NME8Q8N427 588 aa15.56■□□□□ 0.08
UPF1-205ENST00000598209 DBF4BQ8NFT6 615 aa15.56■□□□□ 0.08
UPF1-205ENST00000598209 ABHD14A-ACY1A0A1B0GW23 586 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 TMEM150BA6NC51 233 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 K7ELQ4 463 aaPredicted RBP15.55■□□□□ 0.08
UPF1-205ENST00000598209 M0QZ92 97 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 MAGEB2O15479 319 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 DKC1O60832 514 aaKnown RBP eCLIP15.55■□□□□ 0.08
UPF1-205ENST00000598209 GHRP10912 638 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 ATP2A2P16615 1042 aaKnown RBP15.55■□□□□ 0.08
UPF1-205ENST00000598209 KCNJ6P48051 423 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 TOB1P50616 345 aaPredicted RBP15.55■□□□□ 0.08
UPF1-205ENST00000598209 WDR5P61964 334 aaKnown RBP15.55■□□□□ 0.08
UPF1-205ENST00000598209 IKBKEQ14164 716 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 NBR1Q14596 966 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 KIAA0319LQ8IZA0 1049 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 METTL13Q8N6R0 699 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 SEPT8Q92599 483 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 NIFKQ9BYG3 293 aaKnown RBP15.55■□□□□ 0.08
UPF1-205ENST00000598209 RGL1Q9NZL6 768 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 TRPV2Q9Y5S1 764 aa15.55■□□□□ 0.08
UPF1-205ENST00000598209 LAMA2P24043 3122 aaKnown RBP15.55■□□□□ 0.08
UPF1-205ENST00000598209 DDX11L8A8MPP1 907 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 EFCAB14O75071 495 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 OR52Z1P0C646 297 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 DNAJB2P25686 324 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 PBX2P40425 430 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 LPIN1Q14693 890 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 TARBP2Q15633 366 aaKnown RBP15.54■□□□□ 0.08
UPF1-205ENST00000598209 MTERF2Q49AM1 385 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 FBXO47Q5MNV8 452 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 Q7L0L9 218 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 DEFB123Q8N688 67 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 PHOSPHO2Q8TCD6 241 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 SNX21Q969T3 373 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 DYDC2Q96IM9 177 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 SLC9A7Q96T83 725 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 EIF2AK1Q9BQI3 630 aaKnown RBP15.54■□□□□ 0.08
UPF1-205ENST00000598209 LXNQ9BS40 222 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 PBX4Q9BYU1 374 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 IFIH1Q9BYX4 1025 aaKnown RBP15.54■□□□□ 0.08
UPF1-205ENST00000598209 CELF4Q9BZC1 486 aaKnown RBP15.54■□□□□ 0.08
UPF1-205ENST00000598209 WRAP73Q9P2S5 460 aaPredicted RBP15.54■□□□□ 0.08
UPF1-205ENST00000598209 SZT2Q5T011 3432 aa15.54■□□□□ 0.08
UPF1-205ENST00000598209 KDM3AQ9Y4C1 1321 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 POTEMA6NI47 508 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 CLCN3P51790 818 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 RABGGTBP53611 331 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 CYP4A11Q02928 519 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 TBC1D8BQ0IIM8 1120 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 CTTNQ14247 550 aaKnown RBP15.53■□□□□ 0.08
UPF1-205ENST00000598209 RAB30Q15771 203 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 ZNF697Q5TEC3 545 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 PLA2G4FQ68DD2 849 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 EFCAB12Q6NXP0 572 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 ANO5Q75V66 913 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 C4orf19Q8IY42 314 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 LRRC71Q8N4P6 559 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 LINC01465Q8N7H1 131 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 APBB2Q92870 758 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 INTS4Q96HW7 963 aaKnown RBP15.53■□□□□ 0.08
UPF1-205ENST00000598209 SH2D3AQ9BRG2 576 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 PCDHB6Q9Y5E3 794 aa15.53■□□□□ 0.08
UPF1-205ENST00000598209 MYO9BQ13459 2157 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 SLITRK3O94933 977 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 VTNP04004 478 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 TMOD1P28289 359 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 TECP42680 631 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 DEFB103AP81534 67 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
UPF1-205ENST00000598209 TSHZ1Q6ZSZ6 1077 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 HERC6Q8IVU3 1022 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 TPH2Q8IWU9 490 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 C4orf32Q8N8J7 132 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 NEK9Q8TD19 979 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 TIFAQ96CG3 184 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 CEP89Q96ST8 783 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 MAP7D2Q96T17 732 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 PPP1R16BQ96T49 567 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 ZSWIM4Q9H7M6 989 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 AGO3Q9H9G7 860 aaKnown RBP15.52■□□□□ 0.08
UPF1-205ENST00000598209 SUGCTQ9HAC7 445 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 AKT3Q9Y243 479 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 GINS2Q9Y248 185 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 SQORQ9Y6N5 450 aa15.52■□□□□ 0.08
UPF1-205ENST00000598209 TMEM265A0A087WTH1 108 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
UPF1-205ENST00000598209 SLC34A2O95436 690 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 PDCP20941 246 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 YWHABP31946 246 aaKnown RBP15.51■□□□□ 0.07
UPF1-205ENST00000598209 NPEPPSP55786 919 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 PTGDRQ13258 359 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 RILPL1Q5EBL4 403 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
UPF1-205ENST00000598209 HSCBQ8IWL3 235 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 CEP170P1Q96L14 293 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 FAM161BQ96MY7 647 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms