RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 CASKIN2Q8WXE0 1202 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 GOLGA6L10A0A0M3HER8 536 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 EML1O00423 815 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 TNIP1Q15025 636 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 ANO9A1A5B4 782 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 SLC18A3Q16572 532 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 SLC30A5Q8TAD4 765 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 HNRNPLLQ8WVV9 542 aaKnown RBP13.5□□□□□ -0.25
USHBP1-207ENST00000597928 MAGOHBQ96A72 148 aaKnown RBP13.5□□□□□ -0.25
USHBP1-207ENST00000597928 CABS1Q96KC9 395 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 MYH13Q9UKX3 1938 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 TLR2O60603 784 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 PPFIA4O75335 1185 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 POLR2MP0CAP2 368 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 GALCP54803 685 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 SOX10P56693 466 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 DLGAP5Q15398 846 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 XKR9Q5GH70 373 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 SLFN12Q8IYM2 578 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 RNPC3Q96LT9 517 aaKnown RBP13.5□□□□□ -0.25
USHBP1-207ENST00000597928 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 HEMGNQ9BXL5 484 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 COA1Q9GZY4 146 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 RIOX1Q9H6W3 641 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 FBXL5Q9UKA1 691 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 FZD1Q9UP38 647 aa13.5□□□□□ -0.25
USHBP1-207ENST00000597928 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
USHBP1-207ENST00000597928 FGRP09769 529 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 PEX3P56589 373 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 ZKSCAN8Q15776 578 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-207ENST00000597928 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 CCDC121Q6ZUS5 278 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 CCDC26Q8TAB7 109 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 LMBR1Q8WVP7 490 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 GPRC5CQ9NQ84 441 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
USHBP1-207ENST00000597928 CCPG1Q9ULG6 757 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 PGRMC1O00264 195 aaKnown RBP13.49□□□□□ -0.25
USHBP1-207ENST00000597928 SLC16A4O15374 487 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 ECE2O60344 883 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 EVI5O60447 810 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 MYL7Q01449 175 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 KAZNQ674X7 775 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 LRRC55Q6ZSA7 311 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 GSTA5Q7RTV2 222 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
USHBP1-207ENST00000597928 AFF2P51816 1311 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
USHBP1-207ENST00000597928 MSH4O15457 936 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 STAT2P52630 851 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 LRRC14Q15048 493 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 PARVGQ9HBI0 331 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 CRYBG1Q9Y4K1 1723 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
USHBP1-207ENST00000597928 MAGOHP61326 146 aaKnown RBP13.48□□□□□ -0.25
USHBP1-207ENST00000597928 PDIA5Q14554 519 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 FAM182AQ5T1J6 154 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 PNMA8AQ86V59 439 aaPredicted RBP13.48□□□□□ -0.25
USHBP1-207ENST00000597928 METTL13Q8N6R0 699 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 PLCD4Q9BRC7 762 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 EP400Q96L91 3159 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 GNA14O95837 355 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
USHBP1-207ENST00000597928 MEA1Q16626 185 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 EEPD1Q7L9B9 569 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 DNAJC19Q96DA6 116 aa13.48□□□□□ -0.25
USHBP1-207ENST00000597928 PURBQ96QR8 312 aaKnown RBP13.48□□□□□ -0.25
USHBP1-207ENST00000597928 POP1Q99575 1024 aaKnown RBP13.48□□□□□ -0.25
USHBP1-207ENST00000597928 GRID2IPA4D2P6 1211 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 GOLGA8KD6RF30 607 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 ACSL3O95573 720 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 NPEPPSP55786 919 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 PSMD2Q13200 908 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 E2F5Q15329 346 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 WDR93Q6P2C0 686 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 BAP1Q92560 729 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 ANKS1AQ92625 1134 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 RAVER2Q9HCJ3 691 aaKnown RBP13.47□□□□□ -0.25
USHBP1-207ENST00000597928 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-207ENST00000597928 FRMD3A2A2Y4 597 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 EIF4E1BA6NMX2 242 aaKnown RBP13.47□□□□□ -0.25
USHBP1-207ENST00000597928 KIF4AO95239 1232 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 PON1P27169 355 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 GIT2Q14161 759 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 STXBP4Q6ZWJ1 553 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 GJD4Q96KN9 370 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-207ENST00000597928 AGBL1Q96MI9 1066 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 LBHD1Q9BQE6 289 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-207ENST00000597928 PRR12Q9ULL5 1215 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 CNTNAP4Q9C0A0 1308 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 MYO1FO00160 1098 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 ARP10275 920 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 PLA2G4FQ68DD2 849 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms