RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 TRMT13Q9NUP7 481 aaKnown RBP9.14□□□□□ -0.95
LINC00343-204ENST00000596398 SIP14410 1827 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 MED26O95402 600 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 TGFB1P01137 390 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 PFKMP08237 780 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 EPHA1P21709 976 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 STAT3P40763 770 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 DDX10Q13206 875 aaKnown RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 UVSSAQ2YD98 709 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 HERC4Q5GLZ8 1057 aaPredicted RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 TMEM164Q5U3C3 297 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 KIAA1211Q6ZU35 1233 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 SIAH1Q8IUQ4 282 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 ADHFE1Q8IWW8 467 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 MSL3Q8N5Y2 521 aaKnown RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 MIGA1Q8NAN2 632 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 PPP1R13LQ8WUF5 828 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 ATOH1Q92858 354 aaPredicted RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 UTP4Q969X6 686 aaKnown RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 FTOQ9C0B1 505 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 EHD4Q9H223 541 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 SH2B1Q9NRF2 756 aaPredicted RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 ZNF214Q9UL59 606 aaPredicted RBP9.13□□□□□ -0.95
LINC00343-204ENST00000596398 ADAMTS5Q9UNA0 930 aa9.13□□□□□ -0.95
LINC00343-204ENST00000596398 CHD8Q9HCK8 2581 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 DNAJC25-GNG10A0A024R161 153 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 TMEM221A6NGB7 291 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 M0R296 226 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 VWA5AO00534 786 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 ATG7O95352 703 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 USP5P45974 858 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 ID4P47928 161 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 FSCN1Q16658 493 aaKnown RBP9.12□□□□□ -0.95
LINC00343-204ENST00000596398 DUOXA2Q1HG44 320 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 NOL8Q76FK4 1167 aaKnown RBP9.12□□□□□ -0.95
LINC00343-204ENST00000596398 CEP120Q8N960 986 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 EDAQ92838 391 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 DDX11Q96FC9 970 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 FAM46AQ96IP4 442 aaKnown RBP9.12□□□□□ -0.95
LINC00343-204ENST00000596398 FGD4Q96M96 766 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 UPF3BQ9BZI7 483 aaKnown RBP9.12□□□□□ -0.95
LINC00343-204ENST00000596398 ALDH8A1Q9H2A2 487 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-204ENST00000596398 ABHD16BQ9H3Z7 469 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 COPRSQ9NQ92 184 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 PRKAG3Q9UGI9 489 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 AKAP2Q9Y2D5 859 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 RIPK3Q9Y572 518 aa9.12□□□□□ -0.95
LINC00343-204ENST00000596398 TPRP12270 2363 aaKnown RBP9.12□□□□□ -0.95
LINC00343-204ENST00000596398 TANC1Q9C0D5 1861 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 MED19A0JLT2 244 aaPredicted RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 KIAA1324LA8MWY0 1029 aaPredicted RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 H0Y858 1186 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 CABYRO75952 493 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 VCPP55072 806 aaKnown RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 ERVK-21P61565 698 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 NKX3-2P78367 333 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 DEFB103AP81534 67 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 TNFAIP2Q03169 654 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 CLUL1Q15846 466 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 TMEM63BQ5T3F8 832 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 ARMCX2Q7L311 632 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 BMP8AQ7Z5Y6 402 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 SUGP1Q8IWZ8 645 aaKnown RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 CCDC144CPQ8IYA2 1237 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 REPS2Q8NFH8 660 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 FOXD4L4Q8WXT5 416 aaPredicted RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 TGS1Q96RS0 853 aaKnown RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 PRRX2Q99811 253 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 KATNBL1Q9H079 304 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 TLR9Q9NR96 1032 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 DDX49Q9Y6V7 483 aaKnown RBP9.11□□□□□ -0.95
LINC00343-204ENST00000596398 MYO7AQ13402 2215 aa9.11□□□□□ -0.95
LINC00343-204ENST00000596398 TNKSO95271 1327 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 LINC01553A4QN01 128 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 DDX3YO15523 660 aaKnown RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 DYNC1LI2O43237 492 aaPredicted RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 UBTFL1P0CB47 393 aaPredicted RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 CYP7A1P22680 504 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 KCNJ6P48051 423 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 WDR5P61964 334 aaKnown RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 CCDC184Q52MB2 194 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 PDE12Q6L8Q7 609 aaKnown RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 TTC6Q86TZ1 520 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 TLK2Q86UE8 772 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 ZDHHC13Q8IUH4 622 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 WDR63Q8IWG1 891 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 UBASH3BQ8TF42 649 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 POP1Q99575 1024 aaKnown RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 C17orf80Q9BSJ5 609 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 ADAM19Q9H013 955 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 VCPKMTQ9H867 229 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 PIH1D3Q9NQM4 214 aaKnown RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 GNEQ9Y223 722 aaKnown RBP9.1□□□□□ -0.95
LINC00343-204ENST00000596398 ACACBO00763 2458 aa9.1□□□□□ -0.95
LINC00343-204ENST00000596398 PRR23AA6NEV1 266 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms