RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RGS18Q9NS28 235 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 HCSTQ9UBK5 93 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 SLC12A7Q9Y666 1083 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 FSCN2O14926 492 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 PER2O15055 1255 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 PPFIA3O75145 1194 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 RPS6KA5O75582 802 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 FGF18O76093 207 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 FOSP01100 380 aaPredicted RBP11.37□□□□□ -0.59
LIG1-209ENST00000596104 ATF7P17544 494 aaPredicted RBP11.37□□□□□ -0.59
LIG1-209ENST00000596104 SREBF1P36956 1147 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 ERVFC1P60507 584 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 KCNC3Q14003 757 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 NECTIN1Q15223 517 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 PKN1Q16512 942 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 FAM102BQ5T8I3 360 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 CREB3L3Q68CJ9 461 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 PPP1R18Q6NYC8 613 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 ABHD15Q6UXT9 468 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 SLC24A5Q71RS6 500 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 MICU3Q86XE3 530 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 CCDC60Q8IWA6 550 aaPredicted RBP11.37□□□□□ -0.59
LIG1-209ENST00000596104 PBXIP1Q96AQ6 731 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 CDCA3Q99618 268 aaPredicted RBP11.37□□□□□ -0.59
LIG1-209ENST00000596104 ADAM2Q99965 735 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 TLR9Q9NR96 1032 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 C1orf112Q9NSG2 853 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 ST3GAL5Q9UNP4 418 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 GINS2Q9Y248 185 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 PCDHB7Q9Y5E2 793 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 PCDHB12Q9Y5F1 795 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 C5orf42Q9H799 3197 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 TRIOO75962 3097 aa11.37□□□□□ -0.59
LIG1-209ENST00000596104 WDFY4Q6ZS81 3184 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 TBKBP1A7MCY6 615 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 DHX15O43143 795 aaKnown RBP11.36□□□□□ -0.59
LIG1-209ENST00000596104 ATP4AP20648 1035 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 IBSPP21815 317 aaPredicted RBP11.36□□□□□ -0.59
LIG1-209ENST00000596104 CLK2P49760 499 aaKnown RBP11.36□□□□□ -0.59
LIG1-209ENST00000596104 PTPN5P54829 565 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 NAPAP54920 295 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 FAM189BP81408 668 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 TCF15Q12870 199 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 DSC3Q14574 896 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
LIG1-209ENST00000596104 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 TMEM184AQ6ZMB5 413 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 NIPA1Q7RTP0 329 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 FAM228AQ86W67 206 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 FBXL6Q8N531 539 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 COLGALT1Q8NBJ5 622 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 MICAL1Q8TDZ2 1067 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 CRYGNQ8WXF5 182 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 ASIC4Q96FT7 647 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 S1PR5Q9H228 398 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 CWH43Q9H720 699 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 AAASQ9NRG9 546 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
LIG1-209ENST00000596104 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 COL1A2P08123 1366 aa11.36□□□□□ -0.59
LIG1-209ENST00000596104 IGLV3-22A0A075B6J6 115 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 FSD2A1L4K1 749 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 DENND3A2RUS2 1198 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 FAM86B1E9PN63 330 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 DDX39AO00148 427 aaKnown RBP11.35□□□□□ -0.59
LIG1-209ENST00000596104 BACH1O14867 736 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 GPR182O15218 404 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 C22orf31O95567 290 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 FAM86B2P0C5J1 330 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 FGFR1P11362 822 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 ADCY7P51828 1080 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 CRYBB1P53674 252 aaPredicted RBP11.35□□□□□ -0.59
LIG1-209ENST00000596104 PLCB3Q01970 1234 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 SIGLEC14Q08ET2 396 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 AP3B2Q13367 1082 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 KIZQ2M2Z5 673 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 ZNF484Q5JVG2 852 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 ODR4Q5SWX8 454 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
LIG1-209ENST00000596104 FAM160B1Q5W0V3 765 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 SYCE2Q6PIF2 218 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 SUGP1Q8IWZ8 645 aaKnown RBP11.35□□□□□ -0.59
LIG1-209ENST00000596104 THNSL1Q8IYQ7 743 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 RASGRP4Q8TDF6 673 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 NEK1Q96PY6 1258 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 PRRX2Q99811 253 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 ESYT1Q9BSJ8 1104 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 ELAC1Q9H777 363 aaKnown RBP11.35□□□□□ -0.59
LIG1-209ENST00000596104 RNF19AQ9NV58 838 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 RBM28Q9NW13 759 aaKnown RBP11.35□□□□□ -0.59
LIG1-209ENST00000596104 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
LIG1-209ENST00000596104 TMEM161AQ9NX61 479 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 BARHL2Q9NY43 387 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 LZTS1Q9Y250 596 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 ZDBF2Q9HCK1 2354 aa11.35□□□□□ -0.59
LIG1-209ENST00000596104 SMCO2A6NFE2 343 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms