RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MUC3AQ02505 3323 aa19.99■□□□□ 0.79
SHKBP1-204ENST00000594862 ST18O60284 1047 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 MARCH6O60337 910 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 CCNT1O60563 726 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 C22orf31O95567 290 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 ATP4AP20648 1035 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 TMOD1P28289 359 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 PRKCEQ02156 737 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 TAP1Q03518 808 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 B3GNT9Q6UX72 402 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 SLFN12Q8IYM2 578 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 OXER1Q8TDS5 423 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 KCNMB3Q9NPA1 279 aa19.98■□□□□ 0.79
SHKBP1-204ENST00000594862 ZBTB42B2RXF5 422 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 JAK2O60674 1132 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 BAG4O95429 457 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 HTRA4P83105 476 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 PAK2Q13177 524 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 PPP2R5CQ13362 524 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 DIS3L2Q8IYB7 885 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 TOP1MTQ969P6 601 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 MAP7D2Q96T17 732 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 KIF2CQ99661 725 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 GJB4Q9NTQ9 266 aa19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 RNF216Q9NWF9 866 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-204ENST00000594862 GTPBP6O43824 516 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 SLC37A4O43826 429 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 XKR3Q5GH77 459 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 KRT40Q6A162 431 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 CCDC83Q8IWF9 413 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 KIAA0319LQ8IZA0 1049 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 TNFRSF25Q93038 417 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 SAMD11Q96NU1 681 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 KIF3AQ9Y496 699 aa19.96■□□□□ 0.79
SHKBP1-204ENST00000594862 ST3GAL1Q11201 340 aa19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 NR5A1Q13285 461 aa19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 METTL13Q8N6R0 699 aa19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 SP7Q8TDD2 431 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 ZBTB10Q96DT7 871 aa19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 C8orf76Q96K31 380 aa19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 TGS1Q96RS0 853 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 YME1L1Q96TA2 773 aa19.95■□□□□ 0.78
SHKBP1-204ENST00000594862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 ZNF862O60290 1169 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 POU3F3P20264 500 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 IGFBP4P22692 258 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 PSMC5P62195 406 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 TBC1D8BQ0IIM8 1120 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 TMEM62Q0P6H9 643 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 FAM117BQ6P1L5 589 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 FAM184AQ8NB25 1140 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 JPH2Q9BR39 696 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 NIFKQ9BYG3 293 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 SEPT9Q9UHD8 586 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 VAV3Q9UKW4 847 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 PPME1Q9Y570 386 aa19.94■□□□□ 0.78
SHKBP1-204ENST00000594862 LINC01553A4QN01 128 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 BTBD18B2RXH4 712 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 CD52P31358 61 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 CRYBB1P53674 252 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 ERVK-21P61565 698 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 CDC42EP1Q00587 391 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 ORC2Q13416 577 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 UGCGQ16739 394 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 TMCO2Q7Z6W1 182 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 EXOC8Q8IYI6 725 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 ARNTL2Q8WYA1 636 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 GJA10Q969M2 543 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 OSBPL7Q9BZF2 842 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 PADI3Q9ULW8 664 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 CHD9Q3L8U1 2897 aa19.93■□□□□ 0.78
SHKBP1-204ENST00000594862 LCHNA4D1U4 455 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 GPR182O15218 404 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 RPS6KA5O75582 802 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 QARSP47897 775 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 MCM2P49736 904 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 ADGRE1Q14246 886 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 EFCAB12Q6NXP0 572 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 TRMT1LQ7Z2T5 733 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 TSPYL2Q9H2G4 693 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 FOXP1Q9H334 677 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 AGO3Q9H9G7 860 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 RWDD3Q9Y3V2 267 aa19.92■□□□□ 0.78
SHKBP1-204ENST00000594862 COL4A4P53420 1690 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 ENPP3O14638 875 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 NEMFO60524 1076 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 UPP2O95045 317 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 P4HBP07237 508 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 STAG3L1P0CL83 205 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 DNM2P50570 870 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 EPHA7Q15375 998 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 TARBP2Q15633 366 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 CALCRLQ16602 461 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 EARS2Q5JPH6 523 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 LINC01465Q8N7H1 131 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 NEK9Q8TD19 979 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 HAS1Q92839 578 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 C1orf112Q9NSG2 853 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms