RNA–Protein interactions for RNA: ENST00000594019.5

ZC3H4-202, Transcript of zinc finger CCCH-type containing 4, humanhuman

TSL 2

Gene ZC3H4, Length 3,259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-202ENST00000594019 ESYT3A0FGR9 886 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 GOLGA8IPA6NC78 632 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 GOLGA8JA6NMD2 632 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 TRIM49P0CI25 452 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 TRIM49CP0CI26 452 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 SLC9A1P19634 815 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 HIRAP54198 1017 aaPredicted RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 TTC19Q6DKK2 380 aaPredicted RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 SLFN12Q8IYM2 578 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 GUF1Q8N442 669 aaKnown RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 SPAG5Q96R06 1193 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 RMDN3Q96TC7 470 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 TTYH3Q9C0H2 523 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 NT5C3AQ9H0P0 336 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 PICK1Q9NRD5 415 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 SALL4Q9UJQ4 1053 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 MYH10P35580 1976 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 ZNF536O15090 1300 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 IGLV3-22A0A075B6J6 115 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 FKBP1AP62942 108 aaKnown RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 FKBP3Q00688 224 aaKnown RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 OTOP1Q7RTM1 612 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 IFT81Q8WYA0 676 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 PACSIN1Q9BY11 444 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 VAV3Q9UKW4 847 aa12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 MRPL11Q9Y3B7 192 aaKnown RBP12.39□□□□□ -0.43
ZC3H4-202ENST00000594019 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 SYCP3Q8IZU3 236 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 GOLGA6L1Q8N7Z2 621 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 ARFGEF1Q9Y6D6 1849 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 HMGB2P26583 209 aaKnown RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 UGCGQ16739 394 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 EAPPQ56P03 285 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 ARHGEF16Q5VV41 709 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 RINT1Q6NUQ1 792 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 LRRC55Q6ZSA7 311 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 MIER3Q7Z3K6 550 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 PRPF38AQ8NAV1 312 aaKnown RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 ALS2CR12Q96Q35 445 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 LRRC1Q9BTT6 524 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 MYO1AQ9UBC5 1043 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 CHORDC1Q9UHD1 332 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 L1RE1Q9UN81 338 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 SIK3Q9Y2K2 1263 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 PVALEFA0A1B0GWK0 134 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 USP14P54578 494 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 EHHADHQ08426 723 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 CCDC70Q6NSX1 233 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 PPP1R13LQ8WUF5 828 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 ERGIC2Q96RQ1 377 aa12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 DMGDHQ9UI17 866 aaKnown RBP12.38□□□□□ -0.43
ZC3H4-202ENST00000594019 RPA1P27694 616 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 MRPS9P82933 396 aaKnown RBP12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 RNF146Q9NTX7 359 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 ZSCAN5CA6NGD5 496 aaPredicted RBP12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 IRX3P78415 501 aaPredicted RBP12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 CKAP4Q07065 602 aaKnown RBP12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 ITGB3BPQ13352 177 aaPredicted RBP12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 MTMR1Q13613 665 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 MEA1Q16626 185 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 KIAA0753Q2KHM9 967 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 SLC9C1Q4G0N8 1177 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 KLHL7Q8IXQ5 586 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 CCDC170Q8IYT3 715 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 MSANTD4Q8NCY6 345 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 CENPHQ9H3R5 247 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 RNF181Q9P0P0 153 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
ZC3H4-202ENST00000594019 ARHGEF35A5YM69 484 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 CETN3O15182 167 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 AKAP3O75969 853 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 FECHP22830 423 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 HOXD13P35453 343 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 LRRC63Q05C16 580 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 RNF207Q6ZRF8 634 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 RETREG2Q8NC44 543 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 CLMNQ96JQ2 1002 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 FAM204AQ9H8W3 233 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 HYOU1Q9Y4L1 999 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 CCDC169A6NNP5 214 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 FOSP01100 380 aaPredicted RBP12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 USP8P40818 1118 aa12.36□□□□□ -0.43
ZC3H4-202ENST00000594019 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms