RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SH2D3AQ9BRG2 576 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 PARVGQ9HBI0 331 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 SAMSN1Q9NSI8 373 aaKnown RBP23.05■■□□□ 1.28
PNKP-203ENST00000593946 TBC1D7Q9P0N9 293 aa23.05■■□□□ 1.28
PNKP-203ENST00000593946 TRIM49BA6NDI0 452 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 RGS2P41220 211 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 ZNF75DP51815 510 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 ARHGAP1Q07960 439 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 IRF5Q13568 498 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 CDKAL1Q5VV42 579 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 TRMT1LQ7Z2T5 733 aaKnown RBP23.04■■□□□ 1.28
PNKP-203ENST00000593946 MYOCDQ8IZQ8 938 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 DAW1Q8N136 415 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 SPATA33Q96N06 139 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 APBA2Q99767 749 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 TIPINQ9BVW5 301 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 POLD4Q9HCU8 107 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 SEL1LQ9UBV2 794 aa23.04■■□□□ 1.28
PNKP-203ENST00000593946 CASP8AP2Q9UKL3 1982 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 BICDL2A1A5D9 508 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 NOP56O00567 594 aaKnown RBP23.03■■□□□ 1.28
PNKP-203ENST00000593946 USO1O60763 962 aaKnown RBP23.03■■□□□ 1.28
PNKP-203ENST00000593946 HIP1RO75146 1068 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 LGR5O75473 907 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 ADCYAP1R1P41586 468 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 ACVR2BQ13705 512 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 LRRC41Q15345 812 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 FAM160B1Q5W0V3 765 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 EMID1Q96A84 441 aaPredicted RBP23.03■■□□□ 1.28
PNKP-203ENST00000593946 FLRT1Q9NZU1 646 aa23.03■■□□□ 1.28
PNKP-203ENST00000593946 IGHA2P01877 340 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 OATP04181 439 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 LACTBP83111 547 aaPredicted RBP23.02■■□□□ 1.28
PNKP-203ENST00000593946 OLFML2BQ68BL8 750 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 EPM2AIP1Q7L775 607 aaPredicted RBP23.02■■□□□ 1.28
PNKP-203ENST00000593946 CEP170P1Q96L14 293 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 SEMA6BQ9H3T3 888 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 SEPT9Q9UHD8 586 aaPredicted RBP23.02■■□□□ 1.28
PNKP-203ENST00000593946 EMSYQ7Z589 1322 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 THSD7BQ9C0I4 1608 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 SFI1A8K8P3 1242 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 GH1P01241 217 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 STAT5BP51692 787 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 CASP5P51878 434 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 FANCCQ00597 558 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 LAMC2Q13753 1193 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 TPD52L1Q16890 204 aaPredicted RBP23.02■■□□□ 1.28
PNKP-203ENST00000593946 FOXR2Q6PJQ5 311 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 MYCT1Q8N699 235 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 SCFD1Q8WVM8 642 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 MRFAP1L1Q96HT8 127 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 DUSP9Q99956 384 aaKnown RBP23.02■■□□□ 1.28
PNKP-203ENST00000593946 CFHR5Q9BXR6 569 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 CYP26B1Q9NR63 512 aa23.02■■□□□ 1.28
PNKP-203ENST00000593946 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.01■■□□□ 1.27
PNKP-203ENST00000593946 CYP2B6P20813 491 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 FCGRTP55899 365 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 DUSP28Q4G0W2 176 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 HSP90AA4PQ58FG1 418 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 GJC2Q5T442 439 aaPredicted RBP23.01■■□□□ 1.27
PNKP-203ENST00000593946 ANKRD40Q6AI12 368 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 TRIM47Q96LD4 638 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 FIZ1Q96SL8 496 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 MRPL44Q9H9J2 332 aaKnown RBP23.01■■□□□ 1.27
PNKP-203ENST00000593946 ZHX1Q9UKY1 873 aaPredicted RBP23.01■■□□□ 1.27
PNKP-203ENST00000593946 PCNTO95613 3336 aa23.01■■□□□ 1.27
PNKP-203ENST00000593946 KIF20AO95235 890 aa23■■□□□ 1.27
PNKP-203ENST00000593946 PTGS1P23219 599 aa23■■□□□ 1.27
PNKP-203ENST00000593946 PSMC4P43686 418 aa23■■□□□ 1.27
PNKP-203ENST00000593946 CCL14Q16627 93 aa23■■□□□ 1.27
PNKP-203ENST00000593946 IQSEC1Q6DN90 963 aa23■■□□□ 1.27
PNKP-203ENST00000593946 NIFKQ9BYG3 293 aaKnown RBP23■■□□□ 1.27
PNKP-203ENST00000593946 ARHGAP39Q9C0H5 1083 aa23■■□□□ 1.27
PNKP-203ENST00000593946 AZI2Q9H6S1 392 aa23■■□□□ 1.27
PNKP-203ENST00000593946 MAP2K2P36507 400 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 LRRC63Q05C16 580 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 BMT2Q1RMZ1 405 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 CCDC144BQ3MJ40 725 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 ZCWPW2Q504Y3 356 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 PLPPR4Q7Z2D5 763 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 DRC1Q96MC2 740 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 PDLIM7Q9NR12 457 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 IFNKQ9P0W0 207 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 NKRFO15226 690 aaKnown RBP eCLIP22.99■■□□□ 1.27
PNKP-203ENST00000593946 DGAT1O75907 488 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 MYBP10242 640 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 SMPD1P17405 629 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 CDK11BP21127 795 aaKnown RBP22.99■■□□□ 1.27
PNKP-203ENST00000593946 CDC25BP30305 580 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 ODR4Q5SWX8 454 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 MAEAQ7L5Y9 396 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.99■■□□□ 1.27
PNKP-203ENST00000593946 PPTC7Q8NI37 304 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 XPO4Q9C0E2 1151 aaKnown RBP22.99■■□□□ 1.27
PNKP-203ENST00000593946 THAP9Q9H5L6 903 aa22.99■■□□□ 1.27
PNKP-203ENST00000593946 LARSQ9P2J5 1176 aaKnown RBP22.99■■□□□ 1.27
PNKP-203ENST00000593946 EIF3DO15371 548 aaKnown RBP eCLIP22.98■■□□□ 1.27
PNKP-203ENST00000593946 TBC1D8O95759 1140 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 SERPINC1P01008 464 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 VEGFBP49765 207 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms