RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 APBB2Q92870 758 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 FAM167AQ96KS9 214 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 NAP1L4Q99733 375 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 AGO3Q9H9G7 860 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 VAV3Q9UKW4 847 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 KDM3AQ9Y4C1 1321 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 UNC80Q8N2C7 3258 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 LCHNA4D1U4 455 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 WNT7AO00755 349 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 TBX3O15119 743 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 STBD1O95210 358 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 OATP04181 439 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 PRKCEQ02156 737 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 TAP1Q03518 808 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 TSHZ1Q6ZSZ6 1077 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 TBC1D32Q96NH3 1257 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 RAD9AQ99638 391 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 ZBED2Q9BTP6 218 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 CELF4Q9BZC1 486 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 UPF2Q9HAU5 1272 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 CDHR5Q9HBB8 845 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 NRBP2Q9NSY0 501 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 TRPV2Q9Y5S1 764 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 SQORQ9Y6N5 450 aa20.83■□□□□ 0.93
SHKBP1-202ENST00000593764 TRANK1O15050 2925 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 CD2BP2O95400 341 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 AMHP03971 560 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 FOSL2P15408 326 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 HMGN5P82970 282 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 ADGRE1Q14246 886 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 SPRED2Q7Z698 418 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 MYOCDQ8IZQ8 938 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 LINC01465Q8N7H1 131 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 TOP1MTQ969P6 601 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 CEP131Q9UPN4 1083 aa20.82■□□□□ 0.92
SHKBP1-202ENST00000593764 CD52P31358 61 aa20.81■□□□□ 0.92
SHKBP1-202ENST00000593764 TARBP2Q15633 366 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-202ENST00000593764 FAM117BQ6P1L5 589 aa20.81■□□□□ 0.92
SHKBP1-202ENST00000593764 USP38Q8NB14 1042 aa20.81■□□□□ 0.92
SHKBP1-202ENST00000593764 FBXO18Q8NFZ0 1043 aa20.81■□□□□ 0.92
SHKBP1-202ENST00000593764 C8orf76Q96K31 380 aa20.81■□□□□ 0.92
SHKBP1-202ENST00000593764 CEP89Q96ST8 783 aa20.81■□□□□ 0.92
SHKBP1-202ENST00000593764 EPOPA6NHQ4 379 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 M0QZ92 97 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 ENPP3O14638 875 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 MAGEB2O15479 319 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 ST18O60284 1047 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 HTRA4P83105 476 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 SPIRE1Q08AE8 756 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 METTL13Q8N6R0 699 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 IL27Q8NEV9 243 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 MAFAQ8NHW3 353 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 NIFKQ9BYG3 293 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 CERS4Q9HA82 394 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 LOXHD1Q8IVV2 1947 aa20.8■□□□□ 0.92
SHKBP1-202ENST00000593764 TMEM150BA6NC51 233 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 GPR32O75388 356 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 CLCN3P51790 818 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 XKR3Q5GH77 459 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 EFCAB12Q6NXP0 572 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 RTN4RL1Q86UN2 441 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 SLFN12Q8IYM2 578 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 BANK1Q8NDB2 785 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 TMEM40Q8WWA1 233 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 GAS2L1Q99501 681 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 PADI3Q9ULW8 664 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 INSL6Q9Y581 213 aa20.79■□□□□ 0.92
SHKBP1-202ENST00000593764 VTNP04004 478 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 PSMC5P62195 406 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 SAFBQ15424 915 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 LRRC71Q8N4P6 559 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 LINC01599Q8WXQ3 324 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 TMX3Q96JJ7 454 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 MTMR9Q96QG7 549 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 FOXP1Q9H334 677 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 WRAP73Q9P2S5 460 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 GINS2Q9Y248 185 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 REV3LO60673 3130 aa20.78■□□□□ 0.92
SHKBP1-202ENST00000593764 TTC3P53804 2025 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 LINC01553A4QN01 128 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 RFXAPO00287 272 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 MARCH6O60337 910 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 UPP2O95045 317 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 BAG4O95429 457 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 QARSP47897 775 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 EPHA7Q15375 998 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 KIZQ2M2Z5 673 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 TMEM266Q2M3C6 531 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 ANO5Q75V66 913 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 FAM184AQ8NB25 1140 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 SP7Q8TDD2 431 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 PPP1R16BQ96T49 567 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 SH2D3AQ9BRG2 576 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 TMX1Q9H3N1 280 aa20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 SEPT9Q9UHD8 586 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 NOC2LQ9Y3T9 749 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-202ENST00000593764 DDX11L8A8MPP1 907 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 NEMFO60524 1076 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 P4HBP07237 508 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms