RNA–Protein interactions for RNA: ENST00000593064.5

TCF3-218, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-218ENST00000593064 CYP4A11Q02928 519 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 EDRF1Q3B7T1 1238 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 PRR16Q569H4 304 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 DAAM2Q86T65 1068 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 U2AF1L4Q8WU68 220 aaKnown RBP16.9■□□□□ 0.3
TCF3-218ENST00000593064 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.9■□□□□ 0.33e-6■□□□□ 9.5
TCF3-218ENST00000593064 KCNMB3Q9NPA1 279 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 SLC12A6Q9UHW9 1150 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 GAKO14976 1311 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 FRMD3A2A2Y4 597 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 FAM196BA6NMK8 535 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 GFPT2O94808 682 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 FSBPO95073 299 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 XRCC5P13010 732 aaKnown RBP16.9■□□□□ 0.3
TCF3-218ENST00000593064 EPHA7Q15375 998 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 PBKQ96KB5 322 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 TRIM51Q9BSJ1 452 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
TCF3-218ENST00000593064 SF3B2Q13435 895 aaKnown RBP16.89■□□□□ 0.29
TCF3-218ENST00000593064 CUL1Q13616 776 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 KNOP1Q1ED39 458 aaKnown RBP16.89■□□□□ 0.29
TCF3-218ENST00000593064 QRICH1Q2TAL8 776 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 NOVA2Q9UNW9 492 aaKnown RBP16.89■□□□□ 0.29
TCF3-218ENST00000593064 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 BTNL10A8MVZ5 291 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 RXRBP28702 533 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 SHMT1P34896 483 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 SF3A3Q12874 501 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■□□ 15.6
TCF3-218ENST00000593064 ODF2Q5BJF6 829 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 PPP1R18Q6NYC8 613 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 ANO3Q9BYT9 981 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 PCDHB13Q9Y5F0 798 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 PCDHA1Q9Y5I3 950 aa16.89■□□□□ 0.29
TCF3-218ENST00000593064 SPATA31C1P0DKV0 1188 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 GCFC2P16383 781 aaKnown RBP16.88■□□□□ 0.29
TCF3-218ENST00000593064 FAM163AQ96GL9 167 aaPredicted RBP16.88■□□□□ 0.29
TCF3-218ENST00000593064 DDX20Q9UHI6 824 aaKnown RBP16.88■□□□□ 0.29
TCF3-218ENST00000593064 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 ASTN1O14525 1302 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 ATXN2Q99700 1313 aaKnown RBP16.88■□□□□ 0.29
TCF3-218ENST00000593064 IGSF9BQ9UPX0 1349 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 SCNN1DP51172 638 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 LRIG3Q6UXM1 1119 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 FRMD5Q7Z6J6 570 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 NT5DC3Q86UY8 548 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 KSR1Q8IVT5 923 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 CCDC13Q8IYE1 715 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 SLC35C1Q96A29 364 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 CD248Q9HCU0 757 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 NENFQ9UMX5 172 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 TRAF3IP3Q9Y228 551 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 STXBP5LQ9Y2K9 1186 aa16.88■□□□□ 0.29
TCF3-218ENST00000593064 BHMG1C9JSJ3 638 aaPredicted RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 C6orf229H3BNL8 230 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 CES2O00748 559 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 NR3C1P04150 777 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 H2AFZP0C0S5 128 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 ABCB4P21439 1286 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 MAGOHP61326 146 aaKnown RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 DHX9Q08211 1270 aaKnown RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 C6orf89Q6UWU4 347 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 H2AFVQ71UI9 128 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 EPM2AIP1Q7L775 607 aaPredicted RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 TMC3Q7Z5M5 1100 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 GLYCTKQ8IVS8 523 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 LNX1Q8TBB1 728 aaPredicted RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 MDM1Q8TC05 714 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 MAGOHBQ96A72 148 aaKnown RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 PAGR1Q9BTK6 254 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 RUSC1Q9BVN2 902 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 PDGFDQ9GZP0 370 aaPredicted RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 PPP1R9AQ9ULJ8 1098 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 BRWD3Q6RI45 1802 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 FLOT1O75955 427 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 FGGP02679 453 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 GALCP54803 685 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 JAM2P57087 298 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 IRX3P78415 501 aaPredicted RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 DCAF12L1Q5VU92 463 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 C15orf52Q6ZUT6 534 aaKnown RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
TCF3-218ENST00000593064 OLIG1Q8TAK6 271 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 CYP2W1Q8TAV3 490 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 LRRC45Q96CN5 670 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 CABS1Q96KC9 395 aa16.87■□□□□ 0.29
TCF3-218ENST00000593064 GMNCA6NCL1 334 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 BUB1BO60566 1050 aaPredicted RBP16.86■□□□□ 0.29
TCF3-218ENST00000593064 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
TCF3-218ENST00000593064 PRPF4BQ13523 1007 aaKnown RBP16.86■□□□□ 0.29
TCF3-218ENST00000593064 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 POTEAQ6S8J7 498 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 MICALCLQ6ZW33 695 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 SLFN11Q7Z7L1 901 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 ZFPM1Q8IX07 1006 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 ETNPPLQ8TBG4 499 aa16.86■□□□□ 0.29
TCF3-218ENST00000593064 CEP89Q96ST8 783 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms