RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
VMP1-214ENST00000592106 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 TCEAL5Q5H9L2 206 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 PTCRAQ6ISU1 281 aaPredicted RBP11.51□□□□□ -0.57
VMP1-214ENST00000592106 Q6ZUG5 572 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 CKAP2LQ8IYA6 745 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 SMAP1Q8IYB5 467 aaPredicted RBP11.51□□□□□ -0.57
VMP1-214ENST00000592106 CYP2W1Q8TAV3 490 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 BRF1Q92994 677 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 PABPC5Q96DU9 382 aaKnown RBP11.51□□□□□ -0.57
VMP1-214ENST00000592106 FAM167AQ96KS9 214 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 ZNF577Q9BSK1 485 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 ZMYND12Q9H0C1 365 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 CEP131Q9UPN4 1083 aa11.51□□□□□ -0.57
VMP1-214ENST00000592106 IGKV6D-21A0A0A0MT36 114 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 IPO5O00410 1097 aaKnown RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 PRPF3O43395 683 aaKnown RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 DGKIO75912 1065 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 MMP1P03956 469 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 PSAPP07602 524 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 KLRC1P26715 233 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 HSPA4P34932 840 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 ADD1P35611 737 aaKnown RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 TMEM62Q0P6H9 643 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 TMEM31Q5JXX7 168 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 ZNF746Q6NUN9 644 aaPredicted RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 MTHFD1LQ6UB35 978 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 ABHD15Q6UXT9 468 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 CCDC60Q8IWA6 550 aaPredicted RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 TRAPPC12Q8WVT3 735 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 CLP1Q92989 425 aaKnown RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 P2RX5Q93086 422 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 ZNF689Q96CS4 500 aaPredicted RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 RNF26Q9BY78 433 aaPredicted RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 RC3H2Q9HBD1 1191 aaKnown RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 C1orf112Q9NSG2 853 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 FAM217BQ9NTX9 383 aaPredicted RBP11.5□□□□□ -0.57
VMP1-214ENST00000592106 CLDND1Q9NY35 253 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 PADI3Q9ULW8 664 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 HCN4Q9Y3Q4 1203 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 CHD9Q3L8U1 2897 aa11.5□□□□□ -0.57
VMP1-214ENST00000592106 DENND3A2RUS2 1198 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 GPR182O15218 404 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 RPS6KA5O75582 802 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 SARSP49591 514 aaKnown RBP11.49□□□□□ -0.57
VMP1-214ENST00000592106 NFX1Q12986 1120 aaKnown RBP11.49□□□□□ -0.57
VMP1-214ENST00000592106 SKAP1Q86WV1 359 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 TRIM22Q8IYM9 498 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 GJD3Q8N144 294 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 FBXL16Q8N461 479 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
VMP1-214ENST00000592106 NEK9Q8TD19 979 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 KCNB2Q92953 911 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 ZBTB10Q96DT7 871 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 MAP7D2Q96T17 732 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 C22orf23Q9BZE7 217 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 AAASQ9NRG9 546 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 GINS2Q9Y248 185 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 SAMM50Q9Y512 469 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 SNX14Q9Y5W7 946 aa11.49□□□□□ -0.57
VMP1-214ENST00000592106 TTC3P53804 2025 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 CHD7Q9P2D1 2997 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 IGLV3-22A0A075B6J6 115 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 GRXCR2A6NFK2 248 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 WDR64B1ANS9 1081 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 H3BQ06 376 aaPredicted RBP11.48□□□□□ -0.57
VMP1-214ENST00000592106 GRM6O15303 877 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 EPB41L2O43491 1005 aaKnown RBP11.48□□□□□ -0.57
VMP1-214ENST00000592106 CCNE2O96020 404 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 CPA1P15085 419 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 IL9P15248 144 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 TMOD1P28289 359 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 PAN2Q504Q3 1202 aaKnown RBP11.48□□□□□ -0.57
VMP1-214ENST00000592106 PRR16Q569H4 304 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 SPOUT1Q5T280 376 aaKnown RBP11.48□□□□□ -0.57
VMP1-214ENST00000592106 SWSAP1Q6NVH7 229 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 CPLX2Q6PUV4 134 aaKnown RBP11.48□□□□□ -0.57
VMP1-214ENST00000592106 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 SLC26A6Q9BXS9 759 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 PRKAG3Q9UGI9 489 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 PCDHB7Q9Y5E2 793 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 PCDHA10Q9Y5I2 948 aa11.48□□□□□ -0.57
VMP1-214ENST00000592106 MRPL42Q9Y6G3 142 aaKnown RBP11.48□□□□□ -0.57
VMP1-214ENST00000592106 FSD2A1L4K1 749 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 CPLX1O14810 134 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 MAGEB2O15479 319 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 ALADP13716 330 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 IFNAR1P17181 557 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 IBSPP21815 317 aaPredicted RBP11.47□□□□□ -0.57
VMP1-214ENST00000592106 CIITAP33076 1130 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms