RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 JADE2Q9NQC1 790 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 DDX25Q9UHL0 483 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 AGAP1Q9UPQ3 857 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 DAAM1Q9Y4D1 1078 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 USH1CQ9Y6N9 552 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 PP2D1A8MPX8 630 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 H7C1D1 291 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 GUCY2DQ02846 1103 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 KRT72Q14CN4 511 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 DTHD1Q6ZMT9 781 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 CD302Q8IX05 232 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 PEX5LQ8IYB4 626 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 C1orf131Q8NDD1 294 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 RSPH1Q8WYR4 309 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 RAPGEF5Q92565 580 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 DDAH1O94760 285 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 ACADSP16219 412 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 SMARCA1P28370 1054 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 CD97P48960 835 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 EVX2Q03828 476 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 PAPD7Q5XG87 772 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 IRGCQ6NXR0 463 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 PDXDC2PQ6P474 469 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 LRRC1Q9BTT6 524 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 HAUS4Q9H6D7 363 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 RETREG1Q9H6L5 497 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 SLAIN2Q9P270 581 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 ZMYND8Q9ULU4 1186 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 MACROD2A1Z1Q3 448 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 KRT86O43790 486 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 CNPY1Q3B7I2 92 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 RNF25Q96BH1 459 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 SRPK1Q96SB4 655 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 DRD4P21917 467 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 MSH2P43246 934 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 ARPC4P59998 168 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 MRPS25P82663 173 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 DMPKQ09013 629 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 DDB1Q16531 1140 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 ARHGAP27Q6ZUM4 889 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 CCNJLQ8IV13 435 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 UCMAQ8WVF2 138 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 NCSTNQ92542 709 aa13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 ZMAT2Q96NC0 199 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 RIOK1Q9BRS2 568 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 FBXO9Q9UK97 447 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-217ENST00000591595 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 TPPPO94811 219 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 KRT16P08779 473 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 GNAZP19086 355 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 NFKBIAP25963 317 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 CALML3P27482 149 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 GBP1P32455 592 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 CCNFP41002 786 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 TRAPPC10P48553 1259 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 GUCY2FP51841 1108 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 KRT83P78385 493 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 CFAP157Q5JU67 520 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 GPIHBP1Q8IV16 184 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 CSGALNACT2Q8N6G5 542 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 PDGFRBP09619 1106 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 CYLC1P35663 651 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 DCCP43146 1447 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 RAD23BP54727 409 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 MTTPP55157 894 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 NCALDP61601 193 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 LSAMPQ13449 338 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 NPY5RQ15761 445 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 IL17AQ16552 155 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 ZNF185O15231 689 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 SPATA31D3P0C874 917 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 CYP2D6P10635 497 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 LONP1P36776 959 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 PEX5P50542 639 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 VAV2P52735 878 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 PARP10Q53GL7 1025 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 GRAMD4Q6IC98 578 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 SPATA31D4Q6ZUB0 917 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 HEATR3Q7Z4Q2 680 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 MMGT1Q8N4V1 131 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 TNFRSF25Q93038 417 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 NACC2Q96BF6 587 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 SNX27Q96L92 541 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
SMARCA4-217ENST00000591595 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms