RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ARL10Q8N8L6 244 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 SDR42E1Q8WUS8 393 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 YIPF2Q9BWQ6 316 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 RNPEPL1Q9HAU8 725 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 TBC1D7Q9P0N9 293 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 LIN7AO14910 233 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 NMT2O60551 498 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 SUN1O94901 812 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CBX6O95503 412 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 TPBGLP0DKB5 382 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 MYBP10242 640 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CYP19A1P11511 503 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 KCNA3P22001 575 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 GBP1P32455 592 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 PHKA1P46020 1223 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 MRPS35P82673 323 aaKnown RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 MYBPC3Q14896 1274 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 C1orf131Q8NDD1 294 aaKnown RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 ERGIC2Q96RQ1 377 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 STRBPQ96SI9 672 aaKnown RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 LSM14BQ9BX40 385 aaKnown RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 EPB41L4BQ9H329 900 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 TNKSO95271 1327 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 FGGP02679 453 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 GNAZP19086 355 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 ATP6V1C1P21283 382 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 GSTT1P30711 240 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 MMP13P45452 471 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 NAB2Q15742 525 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CCDC6Q16204 474 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 ERP27Q96DN0 273 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 IFT74Q96LB3 600 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 PLEKHG4BQ96PX9 1271 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 NSRP1Q9H0G5 558 aaKnown RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CNNM1Q9NRU3 951 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CREB3O43889 395 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 PCCAP05165 728 aaPredicted RBP16.44■□□□□ 0.22
CIRBP-228ENST00000590347 PLCG1P19174 1290 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 CALB2P22676 271 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 NPY5RQ15761 445 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 FAM13CQ8NE31 585 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 DYDC2Q96IM9 177 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 UTP11Q9Y3A2 253 aaKnown RBP16.44■□□□□ 0.22
CIRBP-228ENST00000590347 ECM29Q5VYK3 1845 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 PGRMC1O00264 195 aaKnown RBP16.44■□□□□ 0.22
CIRBP-228ENST00000590347 PDE6CP51160 858 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 CNGA2Q16280 664 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 ASTE1Q2TB18 679 aaPredicted RBP16.44■□□□□ 0.22
CIRBP-228ENST00000590347 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 RFWD3Q6PCD5 774 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
CIRBP-228ENST00000590347 SPOCK2Q92563 424 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 NMRK1Q9NWW6 199 aa16.44■□□□□ 0.22
CIRBP-228ENST00000590347 FAM205AQ6ZU69 1335 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 IRS4O14654 1257 aaPredicted RBP16.43■□□□□ 0.22
CIRBP-228ENST00000590347 CETN3O15182 167 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 ATP9AO75110 1047 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 NPTXRO95502 500 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 ACTN1P12814 892 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 KRT13P13646 458 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 PMS2P54278 862 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 CACNA2D1P54289 1103 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 FAM98CQ17RN3 349 aaKnown RBP16.43■□□□□ 0.22
CIRBP-228ENST00000590347 OR52E8Q6IFG1 317 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 NLRP10Q86W26 655 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 BLOC1S6Q9UL45 172 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 HNRNPRO43390 633 aaKnown RBP16.43■□□□□ 0.22
CIRBP-228ENST00000590347 ACSL3O95573 720 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 KLHL30Q0D2K2 578 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 GALNTL6Q49A17 601 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 SFMBT2Q5VUG0 894 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 TCERG1LQ5VWI1 586 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 HOOK3Q86VS8 718 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 KIAA0895Q8NCT3 520 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 SCFD2Q8WU76 684 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 C8orf37Q96NL8 207 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 ERVK-5Q9HDB9 667 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 TMEM120BA0PK00 339 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 PJA2O43164 708 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 INHBCP55103 352 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 LCORLQ8N3X6 602 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 NEK9Q8TD19 979 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 SH3RF3Q8TEJ3 882 aaPredicted RBP16.43■□□□□ 0.22
CIRBP-228ENST00000590347 STK32AQ8WU08 396 aa16.43■□□□□ 0.22
CIRBP-228ENST00000590347 EP400Q96L91 3159 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms