RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 RDM1Q8NG50 284 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 DNAJB3Q8WWF6 145 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 BBXQ8WY36 941 aaPredicted RBP11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 LENG9Q96B70 501 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 RIT2Q99578 217 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 RAD9AQ99638 391 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 ORC3Q9UBD5 711 aaPredicted RBP11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 ATG2AQ2TAZ0 1938 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 FNDC1Q4ZHG4 1894 aaPredicted RBP11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 MSH4O15457 936 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 DHX15O43143 795 aaKnown RBP11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 CHMP2AO43633 222 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 GHRP10912 638 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 KRT2P35908 639 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 SWSAP1Q6NVH7 229 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 MTHFD1LQ6UB35 978 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 FAM43BQ6ZT52 329 aaPredicted RBP11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 NME8Q8N427 588 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 SLC5A5Q92911 643 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 YME1L1Q96TA2 773 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 PHF20Q9BVI0 1012 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 GABBR1Q9UBS5 961 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 DDX25Q9UHL0 483 aaKnown RBP11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 KCNJ14Q9UNX9 436 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 INSL6Q9Y581 213 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 SQORQ9Y6N5 450 aa11.96□□□□□ -0.49
CLPTM1-211ENST00000589347 ZDBF2Q9HCK1 2354 aa11.96□□□□□ -0.5
CLPTM1-211ENST00000589347 CYP3A7-CYP3A51PA0A087WV96 503 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 ADAMTS3O15072 1205 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 TDP2O95551 362 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 CHRNA1P02708 482 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 CYP3A7P24462 503 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 TAP1Q03518 808 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 PAK2Q13177 524 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 INF2Q27J81 1249 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 MARCH8Q5T0T0 291 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 FAM117BQ6P1L5 589 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 MIER3Q7Z3K6 550 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 NEK8Q86SG6 692 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 TRAPPC12Q8WVT3 735 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 ARNTL2Q8WYA1 636 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 AIFM3Q96NN9 605 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 SAMD11Q96NU1 681 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 UIMC1Q96RL1 719 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 TGS1Q96RS0 853 aaKnown RBP11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 MAP7D2Q96T17 732 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 FTHL17Q9BXU8 183 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 DISC1Q9NRI5 854 aa11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 MAFBQ9Y5Q3 323 aaPredicted RBP11.95□□□□□ -0.5
CLPTM1-211ENST00000589347 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 M0R2N6 131 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 MAGEB2O15479 319 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 MARCH6O60337 910 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 LPXNO60711 386 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 DKC1O60832 514 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 ARHGEF15O94989 841 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 OATP04181 439 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 TMOD1P28289 359 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 PRKCEQ02156 737 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 LPIN1Q14693 890 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 ME3Q16798 604 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 TCTN1Q2MV58 587 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 FBXO47Q5MNV8 452 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 FBXL18Q96ME1 805 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 UNC45AQ9H3U1 944 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 NRBP2Q9NSY0 501 aa11.94□□□□□ -0.5
CLPTM1-211ENST00000589347 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 KLRC1P26715 233 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 TMEM62Q0P6H9 643 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 NPY5RQ15761 445 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 PIK3AP1Q6ZUJ8 805 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 TMCO2Q7Z6W1 182 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 FAM178BQ8IXR5 827 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 METTL13Q8N6R0 699 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 NECAB1Q8N987 351 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 NSUN7Q8NE18 718 aaKnown RBP11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 FAM20AQ96MK3 541 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 MBOAT7Q96N66 472 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 CELF4Q9BZC1 486 aaKnown RBP11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 SEPT9Q9UHD8 586 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 LIMCH1Q9UPQ0 1083 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 RWDD3Q9Y3V2 267 aa11.93□□□□□ -0.5
CLPTM1-211ENST00000589347 ADGRA3Q8IWK6 1321 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 LCHNA4D1U4 455 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 LINC01553A4QN01 128 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 TBX3O15119 743 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 PSMD10O75832 226 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 UPP2O95045 317 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 LARGE1O95461 756 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 CTDNEP1O95476 244 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms