RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ARSHQ5FYA8 562 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 ZNF569Q5MCW4 686 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 WDR59Q6PJI9 974 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 STXBP4Q6ZWJ1 553 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 EPM2AIP1Q7L775 607 aaPredicted RBP10.97□□□□□ -0.65
VPS25-202ENST00000589219 KIAA1328Q86T90 577 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 SFR1Q86XK3 245 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 NEK11Q8NG66 645 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 SCFD1Q8WVM8 642 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 GOLGA1Q92805 767 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 RIT2Q99578 217 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 REEP2Q9BRK0 252 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 KCTD10Q9H3F6 313 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 OLFML3Q9NRN5 406 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 SEL1LQ9UBV2 794 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 CDC23Q9UJX2 597 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 TRAF3IP3Q9Y228 551 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 REXO2Q9Y3B8 237 aaKnown RBP10.97□□□□□ -0.65
VPS25-202ENST00000589219 ZHX2Q9Y6X8 837 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 PTPRFP10586 1907 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 MGAMO43451 1857 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 A0A0G2JLL6 359 aaPredicted RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 POTEB2H3BUK9 544 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 PDXKO00764 312 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 KRT86O43790 486 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 H2AFXP16104 143 aaPredicted RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 PSMC4P43686 418 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 HERVK_113P62684 666 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 EPHA7Q15375 998 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 ZYXQ15942 572 aaKnown RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 NFIL3Q16649 462 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 GLIPR1L2Q4G1C9 344 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 PDXDC1Q6P996 788 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 PRRT2Q7Z6L0 340 aaPredicted RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 TRIM59Q8IWR1 403 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 SLC35F6Q8N357 371 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 PRPF38AQ8NAV1 312 aaKnown RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 GLIS3Q8NEA6 775 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 SYN2Q92777 582 aaPredicted RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 JAKMIP2Q96AA8 810 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 CHP1Q99653 195 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 ZNF577Q9BSK1 485 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 TANGO6Q9C0B7 1094 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 NHEJ1Q9H9Q4 299 aaPredicted RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 AGPAT5Q9NUQ2 364 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 TYW1Q9NV66 732 aaKnown RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 CEP72Q9P209 647 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS25-202ENST00000589219 CPA4Q9UI42 421 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.65
VPS25-202ENST00000589219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS25-202ENST00000589219 V9GYY5 206 aaPredicted RBP10.96□□□□□ -0.65
VPS25-202ENST00000589219 MKI67P46013 3256 aaKnown RBP10.96□□□□□ -0.66
VPS25-202ENST00000589219 LOXHD1Q8IVV2 1947 aa10.96□□□□□ -0.66
VPS25-202ENST00000589219 ZSWIM8A7E2V4 1837 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 ZNF536O15090 1300 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 NPHP3-ACAD11A0A0J9YXS1 232 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 SSU72P8A0A1W2PR75 194 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 ANO9A1A5B4 782 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 EML1O00423 815 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 MEIS1O00470 390 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 FAM13AO94988 1023 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 EN2P19622 333 aaPredicted RBP10.95□□□□□ -0.66
VPS25-202ENST00000589219 RPL13P26373 211 aaKnown RBP10.95□□□□□ -0.66
VPS25-202ENST00000589219 KLK7P49862 253 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 VAV2P52735 878 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 CYP4A11Q02928 519 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 MOGSQ13724 837 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 NAA30Q147X3 362 aaPredicted RBP10.95□□□□□ -0.66
VPS25-202ENST00000589219 SPA17Q15506 151 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 KNOP1Q1ED39 458 aaKnown RBP10.95□□□□□ -0.66
VPS25-202ENST00000589219 ERCC6LQ2NKX8 1250 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 FBXO38Q6PIJ6 1188 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 B3GNT9Q6UX72 402 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 SRGAP1Q7Z6B7 1085 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 FRMD5Q7Z6J6 570 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 NELFCDQ8IXH7 590 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 GPR161Q8N6U8 529 aaKnown RBP10.95□□□□□ -0.66
VPS25-202ENST00000589219 RAET1EQ8TD07 263 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 RABGGTAQ92696 567 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 NACC1Q96RE7 527 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 HSD17B14Q9BPX1 270 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 MXRA8Q9BRK3 442 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 FGFBP2Q9BYJ0 223 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 BHMT2Q9H2M3 363 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 ZHX3Q9H4I2 956 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 MMRN2Q9H8L6 949 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 AS3MTQ9HBK9 375 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 METTL14Q9HCE5 456 aaKnown RBP10.95□□□□□ -0.66
VPS25-202ENST00000589219 SRRDQ9UH36 339 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 ODF2LQ9ULJ1 636 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 SLC45A1Q9Y2W3 748 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 BRCA2P51587 3418 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 PHIPQ8WWQ0 1821 aa10.95□□□□□ -0.66
VPS25-202ENST00000589219 ADGRA2Q96PE1 1338 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
VPS25-202ENST00000589219 LCA5LO95447 670 aa10.94□□□□□ -0.66
VPS25-202ENST00000589219 EPB41P11171 864 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms