RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 A0A0G2JNJ9 132 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 CCDC66A2RUB6 948 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 ZNF561-AS1K7EIQ3 104 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 APPP05067 770 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 C1SP09871 688 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 C6orf222P0C671 652 aaPredicted RBP5.12□□□□□ -1.59
VPS4B-203ENST00000588323 HIBADHP31937 336 aaKnown RBP5.12□□□□□ -1.59
VPS4B-203ENST00000588323 MRE11P49959 708 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 GABREP78334 506 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 CD83Q01151 205 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 FOXL1Q12952 345 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 TRIM68Q6AZZ1 485 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 AMER2Q8N7J2 671 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 ZBTB38Q8NAP3 1195 aaPredicted RBP5.12□□□□□ -1.59
VPS4B-203ENST00000588323 IL17DQ8TAD2 202 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 CFHR4Q92496 578 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 OR10A5Q9H207 317 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 NELFAQ9H3P2 528 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 SMURF1Q9HCE7 757 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 TLR9Q9NR96 1032 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 C11orf21Q9P2W6 132 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 Q9UFV3 132 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 MSRB2Q9Y3D2 182 aa5.12□□□□□ -1.59
VPS4B-203ENST00000588323 CCDC85CA6NKD9 419 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 MPIG6BO95866 241 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 MMEP08473 750 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 DPTQ07507 201 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 RASGRF1Q13972 1273 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 FOXB2Q5VYV0 432 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 LRSAM1Q6UWE0 723 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 SGMS1Q86VZ5 419 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 OR14K1Q8NGZ2 314 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 CACTINQ8WUQ7 758 aaKnown RBP5.11□□□□□ -1.59
VPS4B-203ENST00000588323 AMNQ9BXJ7 453 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 PPP1R1BQ9UD71 204 aaPredicted RBP5.11□□□□□ -1.59
VPS4B-203ENST00000588323 FAM184BQ9ULE4 1060 aa5.11□□□□□ -1.59
VPS4B-203ENST00000588323 SCDO00767 359 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 CRTAMO95727 393 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 LACTBP83111 547 aaPredicted RBP5.1□□□□□ -1.59
VPS4B-203ENST00000588323 PURAQ00577 322 aaKnown RBP5.1□□□□□ -1.59
VPS4B-203ENST00000588323 MOGSQ13724 837 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 GRM7Q14831 915 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 SMN1Q16637 294 aaKnown RBP5.1□□□□□ -1.59
VPS4B-203ENST00000588323 KANK2Q63ZY3 851 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 TMEM200BQ69YZ2 307 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 GRAMD4Q6IC98 578 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 D2HGDHQ8N465 521 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 CISD2Q8N5K1 135 aaKnown RBP5.1□□□□□ -1.59
VPS4B-203ENST00000588323 NEU4Q8WWR8 484 aaPredicted RBP5.1□□□□□ -1.59
VPS4B-203ENST00000588323 CEP89Q96ST8 783 aa5.1□□□□□ -1.59
VPS4B-203ENST00000588323 AURKAIP1Q9NWT8 199 aaPredicted RBP5.1□□□□□ -1.59
VPS4B-203ENST00000588323 CCDC9Q9Y3X0 531 aaKnown RBP5.1□□□□□ -1.59
VPS4B-203ENST00000588323 PRAMEF22A3QJZ6 481 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 CAPN14A8MX76 684 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 SLC26A4O43511 780 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 ADH4P08319 380 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 INHBEP58166 350 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 TUBA3CQ13748 450 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 SEC23AQ15436 765 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 TUBA3EQ6PEY2 450 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 ADGRE4PQ86SQ3 457 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 GPR135Q8IZ08 494 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 HIPK4Q8NE63 616 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 ASB15Q8WXK1 588 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 TMEM176AQ96HP8 235 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 EXOC2Q96KP1 924 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 DHRS4Q9BTZ2 278 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 CCDC113Q9H0I3 377 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 IKZF4Q9H2S9 585 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 KCNH7Q9NS40 1196 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 GIT1Q9Y2X7 761 aa5.09□□□□□ -1.59
VPS4B-203ENST00000588323 FOXP2O15409 715 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 CYP27B1O15528 508 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 DIAPH1O60610 1272 aaKnown RBP5.08□□□□□ -1.6
VPS4B-203ENST00000588323 FAM153BP0C7A2 387 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 STAT5BP51692 787 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 INHBCP55103 352 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 NOSTRINQ8IVI9 506 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
VPS4B-203ENST00000588323 SHCBP1Q8NEM2 672 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 CALML6Q8TD86 181 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 ZNF483Q8TF39 744 aaPredicted RBP5.08□□□□□ -1.6
VPS4B-203ENST00000588323 GBP4Q96PP9 640 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 NDOR1Q9UHB4 597 aa5.08□□□□□ -1.6
VPS4B-203ENST00000588323 MRPS23Q9Y3D9 190 aaKnown RBP5.08□□□□□ -1.6
VPS4B-203ENST00000588323 A0A087X1B8 175 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 PMS2P1A4D2B8 440 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 MAKP20794 623 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 HGFACQ04756 655 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 LONRF2Q1L5Z9 754 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 ZNF428Q96B54 188 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 ZNF703Q9H7S9 590 aaPredicted RBP5.07□□□□□ -1.6
VPS4B-203ENST00000588323 MMRN2Q9H8L6 949 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 COQ6Q9Y2Z9 468 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 ASB1Q9Y576 335 aa5.07□□□□□ -1.6
VPS4B-203ENST00000588323 KDM2BQ8NHM5 1336 aa5.06□□□□□ -1.6
VPS4B-203ENST00000588323 EFCAB14O75071 495 aa5.06□□□□□ -1.6
VPS4B-203ENST00000588323 APEX1P27695 318 aaKnown RBP5.06□□□□□ -1.6
VPS4B-203ENST00000588323 MAP3K12Q12852 859 aa5.06□□□□□ -1.6
VPS4B-203ENST00000588323 CRHR2Q13324 411 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms