RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	SPDL1	Q96EA4	605 aa		11.93	□□□□□ -0.5
ILF3-208	ENST00000587928	SCLT1	Q96NL6	688 aa		11.93	□□□□□ -0.5
ILF3-208	ENST00000587928	FAM169A	Q9Y6X4	670 aa		11.93	□□□□□ -0.5
ILF3-208	ENST00000587928	MUT	P22033	750 aa		11.93	□□□□□ -0.5
ILF3-208	ENST00000587928	RPS6KA3	P51812	740 aa		11.93	□□□□□ -0.5
ILF3-208	ENST00000587928	PSMC6	P62333	389 aa		11.93	□□□□□ -0.5
ILF3-208	ENST00000587928	UBXN1	Q04323	297 aa		11.93	□□□□□ -0.5
ILF3-208	ENST00000587928	PMM2	O15305	246 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	DHX15	O43143	795 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	COQ9	O75208	318 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	UBE2S	Q16763	222 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	GBP7	Q8N8V2	638 aa	Predicted RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	MICAL1	Q8TDZ2	1067 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	GDF3	Q9NR23	364 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	GRIN2D	O15399	1336 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	GOLGA6L10	A0A0M3HER8	536 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	ENTPD3	O75355	529 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	EPB41	P11171	864 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	SH3BGR	P55822	239 aa	Predicted RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	C1orf186	Q6ZWK4	172 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	LRRC47	Q8N1G4	583 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	MASTL	Q96GX5	879 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	ZCCHC17	Q9NP64	241 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	GTPBP10	A4D1E9	387 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	HSD17B4	P51659	736 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	NCAPH2	Q6IBW4	605 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	SLC30A9	Q6PML9	568 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	DAW1	Q8N136	415 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	MREG	Q8N565	214 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	CCDC17	Q96LX7	622 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	DHX36	Q9H2U1	1008 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	LZTFL1	Q9NQ48	299 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	USP40	Q9NVE5	1235 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	MAPK8IP1	Q9UQF2	711 aa		11.92	□□□□□ -0.5
ILF3-208	ENST00000587928	N4BP3	O15049	544 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	STBD1	O95210	358 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	LETM2	Q2VYF4	491 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	CCDC155	Q8N6L0	562 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	CAVIN3	Q969G5	261 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	TEKT1	Q969V4	418 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	SLF1	Q9BQI6	1058 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	PSMA7	O14818	248 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	TPD52L2	O43399	206 aa	Known RBP	11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	CCDC121	Q6ZUS5	278 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	RASGEF1C	Q8N431	466 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	CSGALNACT2	Q8N6G5	542 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	LRRC27	Q9C0I9	530 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	CEP72	Q9P209	647 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	HPCAL4	Q9UM19	191 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	PCDHA3	Q9Y5H8	950 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928		H0YIN7	160 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	EML1	O00423	815 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	CEP104	O60308	925 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	EEF2	P13639	858 aa	Known RBP	11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	PTGER2	P43116	358 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	PREPL	Q4J6C6	727 aa	Predicted RBP	11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	MEI1	Q5TIA1	1274 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	HAUS3	Q68CZ6	603 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	PDE11A	Q9HCR9	933 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	MSH4	O15457	936 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	PDE4D	Q08499	809 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	OTOP1	Q7RTM1	612 aa		11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	EIF1AD	Q8N9N8	165 aa	Known RBP	11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	DDX25	Q9UHL0	483 aa	Known RBP	11.91	□□□□□ -0.5
ILF3-208	ENST00000587928	NCAN	O14594	1321 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928		H0YGN5	161 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	N4BP1	O75113	896 aa	Known RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	KRT18	P05783	430 aa	Known RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	HADHB	P55084	474 aa	Known RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	SFSWAP	Q12872	951 aa	Known RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	NFS1	Q9Y697	457 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	CTAGE9	A4FU28	777 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	LRRC53	A6NM62	1247 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	DYNC1I2	Q13409	638 aa	Known RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	NAB2	Q15742	525 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	CCDC92	Q53HC0	331 aa	Predicted RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	ZNF569	Q5MCW4	686 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	CPLX3	Q8WVH0	158 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	MCM8	Q9UJA3	840 aa		11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.9	□□□□□ -0.5
ILF3-208	ENST00000587928	TP73	O15350	636 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	CREB3	O43889	395 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	CCT5	P48643	541 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	MRPL12	P52815	198 aa	Known RBP	11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	SESN3	P58005	492 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	SPP2	Q13103	211 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	FKBP1C	Q5VVH2	108 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	PPP4R3CP	Q6ZMV5	832 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	SLC9A9	Q8IVB4	645 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	COG1	Q8WTW3	980 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	TEPSIN	Q96N21	525 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	FAN1	Q9Y2M0	1017 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	PCDHA13	Q9Y5I0	950 aa		11.9	□□□□□ -0.51
ILF3-208	ENST00000587928	KDM3A	Q9Y4C1	1321 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms