RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ARIH1Q9Y4X5 557 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-205ENST00000587888 DENND3A2RUS2 1198 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 IPO5O00410 1097 aaKnown RBP16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 DHX15O43143 795 aaKnown RBP16.09■□□□□ 0.17
ERCC1-205ENST00000587888 MBTPS2O43462 519 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 DCXO43602 365 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 MGEA5O60502 916 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 RPS6KA5O75582 802 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ATP4AP20648 1035 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 IRS1P35568 1242 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 KRT32Q14532 448 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 PFKFB3Q16875 520 aaPredicted RBP16.09■□□□□ 0.17
ERCC1-205ENST00000587888 NAALADL2Q58DX5 795 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ZNF484Q5JVG2 852 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 SPOUT1Q5T280 376 aaKnown RBP16.09■□□□□ 0.17
ERCC1-205ENST00000587888 MIS18BP1Q6P0N0 1132 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ADGRD2Q7Z7M1 963 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
ERCC1-205ENST00000587888 POF1BQ8WVV4 589 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ADAM2Q99965 735 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ZNF577Q9BSK1 485 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ERVK-5Q9HDB9 667 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 CD207Q9UJ71 328 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 KDM3AQ9Y4C1 1321 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
ERCC1-205ENST00000587888 C19orf67A6NJJ6 358 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 TBX10O75333 385 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 HMGB1P09429 215 aaKnown RBP16.08■□□□□ 0.16
ERCC1-205ENST00000587888 SARSP49591 514 aaKnown RBP16.08■□□□□ 0.16
ERCC1-205ENST00000587888 NDUFV1P49821 464 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.16
ERCC1-205ENST00000587888 SMAD2Q15796 467 aaKnown RBP16.08■□□□□ 0.16
ERCC1-205ENST00000587888 Q6ZUG5 572 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 METTL13Q8N6R0 699 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 MICAL1Q8TDZ2 1067 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 TMEM40Q8WWA1 233 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 PPP2R3CQ969Q6 453 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 UPF3BQ9BZI7 483 aaKnown RBP16.08■□□□□ 0.16
ERCC1-205ENST00000587888 ST3GAL5Q9UNP4 418 aa16.08■□□□□ 0.16
ERCC1-205ENST00000587888 MYO7AQ13402 2215 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 TBKBP1A7MCY6 615 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 ZBTB42B2RXF5 422 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 CDC45O75419 566 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 CYP3A4P08684 503 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 NRIP1P48552 1158 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 KIZQ2M2Z5 673 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 FAM102BQ5T8I3 360 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
ERCC1-205ENST00000587888 C6orf50Q9HD87 102 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 RGS18Q9NS28 235 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 PCDHGC5Q9Y5F6 944 aa16.07■□□□□ 0.16
ERCC1-205ENST00000587888 COL1A2P08123 1366 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 GPR182O15218 404 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 VTNP04004 478 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 HOXD11P31277 338 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-205ENST00000587888 SMAD4Q13485 552 aaKnown RBP16.06■□□□□ 0.16
ERCC1-205ENST00000587888 PRR16Q569H4 304 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 SLC24A5Q71RS6 500 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 BBXQ8WY36 941 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-205ENST00000587888 BRF1Q92994 677 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 JAKMIP1Q96N16 626 aaKnown RBP16.06■□□□□ 0.16
ERCC1-205ENST00000587888 OSMRQ99650 979 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 TBC1D22BQ9NU19 505 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
ERCC1-205ENST00000587888 KIAA1671Q9BY89 1806 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 PRPF3O43395 683 aaKnown RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 C22orf31O95567 290 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 PSAPP07602 524 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 CRYBB1P53674 252 aaPredicted RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 RCAN1P53805 252 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 AKAP17AQ02040 695 aaKnown RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 PKN1Q16512 942 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 ZNF746Q6NUN9 644 aaPredicted RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 REXO1Q8N1G1 1221 aaKnown RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 EFHBQ8N7U6 833 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 CRYGNQ8WXF5 182 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 PHKBQ93100 1093 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 POP1Q99575 1024 aaKnown RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 TLE6Q9H808 572 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 AAASQ9NRG9 546 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 C1orf112Q9NSG2 853 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 TYW1Q9NV66 732 aaKnown RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 CLEC1BQ9P126 229 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 HCSTQ9UBK5 93 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 PCDHA10Q9Y5I2 948 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 MAFBQ9Y5Q3 323 aaPredicted RBP16.05■□□□□ 0.16
ERCC1-205ENST00000587888 EVPLQ92817 2033 aa16.05■□□□□ 0.16
ERCC1-205ENST00000587888 ESYT2A0FGR8 921 aa16.04■□□□□ 0.16
ERCC1-205ENST00000587888 C9IYK1 514 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms