RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 CHST14Q8NCH0 376 aa6.54□□□□□ -1.36
CACNA1A-208ENST00000587451 LRRC37BQ96QE4 947 aa6.54□□□□□ -1.36
CACNA1A-208ENST00000587451 MEGF9Q9H1U4 602 aa6.54□□□□□ -1.36
CACNA1A-208ENST00000587451 PCIF1Q9H4Z3 704 aa6.54□□□□□ -1.36
CACNA1A-208ENST00000587451 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
CACNA1A-208ENST00000587451 Q9UFV3 132 aa6.54□□□□□ -1.36
CACNA1A-208ENST00000587451 MPIG6BO95866 241 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 KCNA6P17658 529 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 FNTBP49356 437 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 SELENOPP49908 381 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 SQSTM1Q13501 440 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 TCEA2Q15560 299 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 ZNF174Q15697 407 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 GRAMD4Q6IC98 578 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 ABHD17CQ6PCB6 329 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 RTKN2Q8IZC4 609 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 NEIL1Q96FI4 390 aaPredicted RBP6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 AMNQ9BXJ7 453 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 MSL2Q9HCI7 577 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 ACSS2Q9NR19 701 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 NR2E1Q9Y466 385 aa6.53□□□□□ -1.36
CACNA1A-208ENST00000587451 C1QTNF3-AMACRE9PGA6 284 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 H7C1D1 291 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 RFPL3O75679 317 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 ASMTLO95671 621 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 APEX1P27695 318 aaKnown RBP6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 KIF11P52732 1056 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 CD83Q01151 205 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 PUM1Q14671 1186 aaKnown RBP eCLIP6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 ICAM4Q14773 271 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 EIF4HQ15056 248 aaKnown RBP6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 HOMER1Q86YM7 354 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 DNERQ8NFT8 737 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 ERCC4Q92889 916 aaPredicted RBP6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 PTPN18Q99952 460 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 KLC2Q9H0B6 622 aa6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 MAGEC2Q9UBF1 373 aaPredicted RBP6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 TNPO3Q9Y5L0 923 aaKnown RBP6.52□□□□□ -1.37
CACNA1A-208ENST00000587451 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 GOLGA6L22H0YM25 854 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 ZNF623O75123 536 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 GLRX3O76003 335 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 MECP2P51608 486 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 MOGSQ13724 837 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 TM4SF20Q53R12 229 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 CATSPEREQ5SY80 951 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 PIK3R6Q5UE93 754 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 KANK2Q63ZY3 851 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 TMEM200BQ69YZ2 307 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 LRSAM1Q6UWE0 723 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 NME9Q86XW9 330 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 FOXB1Q99853 325 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 INTS7Q9NVH2 962 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 OAZ3Q9UMX2 235 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 PTPN22Q9Y2R2 807 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 TSC22D4Q9Y3Q8 395 aa6.51□□□□□ -1.37
CACNA1A-208ENST00000587451 PTPDC1A2A3K4 754 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 DNAJC8O75937 253 aaPredicted RBP6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 CYP17A1P05093 508 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 CR2P20023 1033 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 ALDH6A1Q02252 535 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 ROM1Q03395 351 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 PABPC4Q13310 644 aaKnown RBP eCLIP6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 AGBL4Q5VU57 503 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 FSTL4Q6MZW2 842 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 USP30Q70CQ3 517 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 GGNQ86UU5 652 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 TAX1BP1Q86VP1 789 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 GNRHR2Q96P88 292 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 OR10A2Q9H208 303 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 C12orf65Q9H3J6 166 aaKnown RBP6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 CD248Q9HCU0 757 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 CDC42EP3Q9UKI2 254 aa6.5□□□□□ -1.37
CACNA1A-208ENST00000587451 RASSF10A6NK89 507 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 PPP1R12AO14974 1030 aaPredicted RBP6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 MUSKO15146 869 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 CDC14BO60729 498 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 JMJD7P0C870 316 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 ZBTB48P10074 688 aaPredicted RBP6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 SESN2P58004 480 aaPredicted RBP6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 NFYCQ13952 458 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 PCOLCEQ15113 449 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 RNF151Q2KHN1 245 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 CFAP100Q494V2 611 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 ZNF585AQ6P3V2 769 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 APPBP2Q92624 585 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 FAM184BQ9ULE4 1060 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 ZFR2Q9UPR6 939 aaKnown RBP6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 ZKSCAN5Q9Y2L8 839 aa6.49□□□□□ -1.37
CACNA1A-208ENST00000587451 UBA6A0AVT1 1052 aaPredicted RBP6.48□□□□□ -1.37
CACNA1A-208ENST00000587451 MAFGO15525 162 aa6.48□□□□□ -1.37
CACNA1A-208ENST00000587451 RPS19P39019 145 aaKnown RBP6.48□□□□□ -1.37
CACNA1A-208ENST00000587451 MRE11P49959 708 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms