RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 SCFD2Q8WU76 684 aa18.44■□□□□ 0.54
PRKCSH-205ENST00000587327 CCDC17Q96LX7 622 aa18.44■□□□□ 0.54
PRKCSH-205ENST00000587327 ISCUQ9H1K1 167 aa18.44■□□□□ 0.54
PRKCSH-205ENST00000587327 MEIS1O00470 390 aa18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 TBX3O15119 743 aa18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 CALUO43852 315 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 AKAP3O75969 853 aa18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 HSPA9P38646 679 aaKnown RBP18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 SH3BP5LQ7L8J4 393 aa18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 IDI2Q9BXS1 227 aa18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 FBXL5Q9UKA1 691 aa18.43■□□□□ 0.54
PRKCSH-205ENST00000587327 NDUFAB1O14561 156 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 ANXA13P27216 316 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 HDLBPQ00341 1268 aaKnown RBP18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 EPHA7Q15375 998 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 MKL1Q969V6 931 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 RNPC3Q96LT9 517 aaKnown RBP18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 P2RX7Q99572 595 aaKnown RBP18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 GOLPH3Q9H4A6 298 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 RAD21O60216 631 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 ZEB2O60315 1214 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 FLOT1O75955 427 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 ERVK-9P63128 1117 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 AOC3Q16853 763 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 Q4G0T1 1027 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 CALR3Q96L12 384 aaKnown RBP18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 ATP6V1G3Q96LB4 118 aa18.42■□□□□ 0.54
PRKCSH-205ENST00000587327 CEP104O60308 925 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 ZBTB48P10074 688 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 ECHS1P30084 290 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 RBM5P52756 815 aaKnown RBP eCLIP18.41■□□□□ 0.549e-8■■□□□ 11.4
PRKCSH-205ENST00000587327 CUL1Q13616 776 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 BMT2Q1RMZ1 405 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 DCAF17Q5H9S7 520 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 TPCN2Q8NHX9 752 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 DCAF4Q8WV16 495 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 LENG9Q96B70 501 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 METTL14Q9HCE5 456 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 NENFQ9UMX5 172 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 SAMM50Q9Y512 469 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 HMGB1P1B2RPK0 211 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 NR3C1P04150 777 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 NR1D1P20393 614 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 RPL13P26373 211 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 LSP1P33241 339 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 JAM2P57087 298 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 MCTP2Q6DN12 878 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 DNAAF5Q86Y56 855 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 SLC35C1Q96A29 364 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 SIX2Q9NPC8 291 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 TYW1Q9NV66 732 aaKnown RBP18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 PLAAQ9Y263 795 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 ATP8B3O60423 1300 aa18.41■□□□□ 0.54
PRKCSH-205ENST00000587327 PGRMC1O00264 195 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 SLC16A3O15427 465 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 SART1O43290 800 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 GUCY1A3Q02108 690 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 HLTFQ14527 1009 aaKnown RBP eCLIP18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 SLFN13Q68D06 897 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 B4GALNT4Q76KP1 1039 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 SLFN11Q7Z7L1 901 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 MICALL1Q8N3F8 863 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 LMBR1Q8WVP7 490 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.4■□□□□ 0.543e-13■■■□□ 18.9
PRKCSH-205ENST00000587327 EPN3Q9H201 632 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 SERPINA10Q9UK55 444 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 STK24Q9Y6E0 443 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 BHMG1C9JSJ3 638 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 FAM86B1E9PN63 330 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 FAM86B2P0C5J1 330 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 RXRBP28702 533 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 TCERG1LQ5VWI1 586 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 VPS36Q86VN1 386 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 METTL13Q8N6R0 699 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 FAM20AQ96MK3 541 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 AP1M1Q9BXS5 423 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 NYAP2Q9P242 653 aa18.4■□□□□ 0.54
PRKCSH-205ENST00000587327 ASTN1O14525 1302 aa18.39■□□□□ 0.54
PRKCSH-205ENST00000587327 A0A0A6YYK5 440 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 RSPH10B2B2RC85 870 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 ERLIN2O94905 339 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 RSPH10BP0C881 870 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 CASP4P49662 377 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 CEP85LQ5SZL2 805 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 LRIG3Q6UXM1 1119 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 MAATS1Q7Z4T9 603 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 AMNQ9BXJ7 453 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 GCNT4Q9P109 453 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 AJAP1Q9UKB5 411 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 INTUQ9ULD6 942 aa18.39■□□□□ 0.53
PRKCSH-205ENST00000587327 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 GTPBP10A4D1E9 387 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 PPP1R37O75864 691 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 H2AFZP0C0S5 128 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms