RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 C4orf19Q8IY42 314 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 NME8Q8N427 588 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 METTL13Q8N6R0 699 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 NEK9Q8TD19 979 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 DNAJB3Q8WWF6 145 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 DHX38Q92620 1227 aaKnown RBP7.34□□□□□ -1.23
NPC1-206ENST00000587223 ZBTB10Q96DT7 871 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 SCLYQ96I15 445 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 CTAGE1Q96RT6 745 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 GDF15Q99988 308 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 HSD17B14Q9BPX1 270 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 MFRPQ9BY79 579 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 NIFKQ9BYG3 293 aaKnown RBP7.34□□□□□ -1.23
NPC1-206ENST00000587223 FTOQ9C0B1 505 aaKnown RBP eCLIP7.34□□□□□ -1.23
NPC1-206ENST00000587223 FAM49AQ9H0Q0 323 aaPredicted RBP7.34□□□□□ -1.23
NPC1-206ENST00000587223 WDR70Q9NW82 654 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 LRWD1Q9UFC0 647 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 SEPT9Q9UHD8 586 aaPredicted RBP7.34□□□□□ -1.23
NPC1-206ENST00000587223 PCDHA2Q9Y5H9 948 aa7.34□□□□□ -1.23
NPC1-206ENST00000587223 SMIM35A0A1B0GVV1 85 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 VWA3AA6NCI4 1184 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 RSPH10B2B2RC85 870 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 CAND2O75155 1236 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 STBD1O95210 358 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 FGBP02675 491 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 RSPH10BP0C881 870 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 ZSCAN22P10073 491 aaPredicted RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 ACRP10323 421 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 XRCC6P12956 609 aaKnown RBP eCLIP7.33□□□□□ -1.24
NPC1-206ENST00000587223 TMOD1P28289 359 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 YWHABP31946 246 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 RFC2P35250 354 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 CCT6AP40227 531 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 ATP2C1P98194 919 aaPredicted RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 CEBPZQ03701 1054 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 RBL2Q08999 1139 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 TBC1D8BQ0IIM8 1120 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 IL17AQ16552 155 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 TRIM71Q2Q1W2 868 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 XKR9Q5GH70 373 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 ZNF618Q5T7W0 954 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 IER5Q5VY09 327 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 ARL6IP4Q66PJ3 421 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 EFCAB12Q6NXP0 572 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 RUFY4Q6ZNE9 571 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 ANO5Q75V66 913 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 DEFB128Q7Z7B8 93 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 RPAINQ86UA6 219 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 CATSPER3Q86XQ3 398 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 WNT8BQ93098 351 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 CEP170P1Q96L14 293 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 CCDC43Q96MW1 224 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 ZNF396Q96N95 335 aaPredicted RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 SH2D3AQ9BRG2 576 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 LXNQ9BS40 222 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 POLR3CQ9BUI4 534 aaPredicted RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 WNT8AQ9H1J5 351 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 SUGCTQ9HAC7 445 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 TUFT1Q9NNX1 390 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 IL23AQ9NPF7 189 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 TFIP11Q9UBB9 837 aaKnown RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 COLQQ9Y215 455 aaPredicted RBP7.33□□□□□ -1.24
NPC1-206ENST00000587223 CLIC4Q9Y696 253 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 BRCA2P51587 3418 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 WDR81Q562E7 1941 aa7.33□□□□□ -1.24
NPC1-206ENST00000587223 EVPLQ92817 2033 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 A0A087WWV3 80 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 TMEM150BA6NC51 233 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 ZBTB42B2RXF5 422 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 M0QZ92 97 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 ZBTB39O15060 712 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 MED24O75448 989 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 LYPLA2O95372 231 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 C22orf31O95567 290 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 F13A1P00488 732 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 CTSHP09668 335 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 RPA1P27694 616 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 ANP32AP39687 249 aaKnown RBP7.32□□□□□ -1.24
NPC1-206ENST00000587223 DNM2P50570 870 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 EPHB4P54760 987 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 NPEPPSP55786 919 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 TMEM62Q0P6H9 643 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 STK38Q15208 465 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 SHHQ15465 462 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 TARBP2Q15633 366 aaKnown RBP7.32□□□□□ -1.24
NPC1-206ENST00000587223 ZRSR1Q15695 479 aaKnown RBP7.32□□□□□ -1.24
NPC1-206ENST00000587223 FOXD4L6Q3SYB3 417 aaPredicted RBP7.32□□□□□ -1.24
NPC1-206ENST00000587223 KRT79Q5XKE5 535 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 HAUS3Q68CZ6 603 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 PLA2G4FQ68DD2 849 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 FOXD4L3Q6VB84 417 aaPredicted RBP7.32□□□□□ -1.24
NPC1-206ENST00000587223 ZNF365Q70YC5 407 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 C16orf59Q7L2K0 433 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 EXOC8Q8IYI6 725 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 KIAA0319LQ8IZA0 1049 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 IGSF22Q8N9C0 903 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 SNX29Q8TEQ0 813 aa7.32□□□□□ -1.24
NPC1-206ENST00000587223 PIGOQ8TEQ8 1089 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms