RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	TOP1MT	Q969P6	601 aa		18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	UNC45A	Q9H3U1	944 aa		18.64	■□□□□ 0.57
CIRBP-204	ENST00000585630	CHMP2A	O43633	222 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	SLC37A4	O43826	429 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	PRKCE	Q02156	737 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	TMEM62	Q0P6H9	643 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	UGCG	Q16739	394 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	B3GNT9	Q6UX72	402 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	NEK8	Q86SG6	692 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	NME8	Q8N427	588 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	GJA10	Q969M2	543 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	TGS1	Q96RS0	853 aa	Known RBP	18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	CELF4	Q9BZC1	486 aa	Known RBP	18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	AGO3	Q9H9G7	860 aa	Known RBP	18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	DDX25	Q9UHL0	483 aa	Known RBP	18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	CEP131	Q9UPN4	1083 aa		18.63	■□□□□ 0.57
CIRBP-204	ENST00000585630	VCAN	P13611	3396 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	RFXAP	O00287	272 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	ZNF862	O60290	1169 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	OAT	P04181	439 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	GCFC2	P16383	781 aa	Known RBP	18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	CD52	P31358	61 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	ERVK-21	P61565	698 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	ST3GAL1	Q11201	340 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	OXER1	Q8TDS5	423 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	LINC01599	Q8WXQ3	324 aa		18.62	■□□□□ 0.57
CIRBP-204	ENST00000585630	GTPBP6	O43824	516 aa	Predicted RBP	18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	LPXN	O60711	386 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	GRB10	Q13322	594 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	CCDC85B	Q15834	202 aa	Predicted RBP	18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	LETM2	Q2VYF4	491 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	PPP4R3A	Q6IN85	833 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	KIAA0319L	Q8IZA0	1049 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	GDPD5	Q8WTR4	605 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	YME1L1	Q96TA2	773 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	KCNMB3	Q9NPA1	279 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	MTCH2	Q9Y6C9	303 aa		18.61	■□□□□ 0.57
CIRBP-204	ENST00000585630	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	TTC28	Q96AY4	2481 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	JAK2	O60674	1132 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	UPP2	O95045	317 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	KRT2	P35908	639 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	PAK2	Q13177	524 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	PIK3AP1	Q6ZUJ8	805 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	MIER3	Q7Z3K6	550 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	TNFRSF25	Q93038	417 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	NAP1L4	Q99733	375 aa	Known RBP	18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	FTHL17	Q9BXU8	183 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	RC3H2	Q9HBD1	1191 aa	Known RBP	18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	BRMS1	Q9HCU9	246 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	MTUS1	Q9ULD2	1270 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	BRWD1	Q9NSI6	2320 aa		18.6	■□□□□ 0.57
CIRBP-204	ENST00000585630	ADGRA3	Q8IWK6	1321 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	MAGEB2	O15479	319 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	NR5A1	Q13285	461 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	EARS2	Q5JPH6	523 aa	Known RBP	18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	MICALL1	Q8N3F8	863 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	LINC01465	Q8N7H1	131 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	SYMPK	Q92797	1274 aa	Known RBP	18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	SAMD11	Q96NU1	681 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	KIF2C	Q99661	725 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	PRDM6	Q9NQX0	595 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	THEG	Q9P2T0	379 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	VAV3	Q9UKW4	847 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	PADI3	Q9ULW8	664 aa		18.59	■□□□□ 0.57
CIRBP-204	ENST00000585630	FAM205C	A6NFA0	338 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	MMP1	P03956	469 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	CLCN3	P51790	818 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	PPP2R5C	Q13362	524 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	KRT40	Q6A162	431 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	FAM43B	Q6ZT52	329 aa	Predicted RBP	18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	TMEM40	Q8WWA1	233 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	FAM20A	Q96MK3	541 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	C17orf80	Q9BSJ5	609 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	SUGCT	Q9HAC7	445 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	LIMCH1	Q9UPQ0	1083 aa		18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	SPTBN5	Q9NRC6	3674 aa	Known RBP	18.58	■□□□□ 0.56
CIRBP-204	ENST00000585630	XIRP2	A4UGR9	3374 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	ENPP3	O14638	875 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	TBX3	O15119	743 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	CCNT1	O60563	726 aa	Known RBP	18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	VTN	P04004	478 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	TARBP2	Q15633	366 aa	Known RBP	18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	POTED	Q86YR6	584 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	METTL13	Q8N6R0	699 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	FBXO22	Q8NEZ5	403 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	MAP7D2	Q96T17	732 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	TMX1	Q9H3N1	280 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	ERVK-5	Q9HDB9	667 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	NRBP2	Q9NSY0	501 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	GINS2	Q9Y248	185 aa		18.57	■□□□□ 0.56
CIRBP-204	ENST00000585630	GPR32	O75388	356 aa		18.56	■□□□□ 0.56
CIRBP-204	ENST00000585630	RBM25	P49756	843 aa	Known RBP	18.56	■□□□□ 0.56
CIRBP-204	ENST00000585630	CRYBB1	P53674	252 aa	Predicted RBP	18.56	■□□□□ 0.56
CIRBP-204	ENST00000585630	TRIM29	Q14134	588 aa		18.56	■□□□□ 0.56
CIRBP-204	ENST00000585630	KIZ	Q2M2Z5	673 aa		18.56	■□□□□ 0.56

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