RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
SDF2-202ENST00000585428 ATP8B4Q8TF62 1192 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 TMEM40Q8WWA1 233 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 EDAQ92838 391 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 PPP2R3CQ969Q6 453 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 FBXL18Q96ME1 805 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 MUTYHQ9UIF7 546 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 NOC2LQ9Y3T9 749 aaKnown RBP16.49■□□□□ 0.23
SDF2-202ENST00000585428 PCDHB7Q9Y5E2 793 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
SDF2-202ENST00000585428 WDFY4Q6ZS81 3184 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 C9IYK1 514 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 FAM86B1E9PN63 330 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 hCG_1984214I3L0E3 225 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 CSPG5O95196 566 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 CYP3A4P08684 503 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 FAM86B2P0C5J1 330 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 NRIP1P48552 1158 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 ADCY7P51828 1080 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
SDF2-202ENST00000585428 AP3B2Q13367 1082 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 SWSAP1Q6NVH7 229 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 SLC24A5Q71RS6 500 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 ZNF713Q8N859 430 aaPredicted RBP16.48■□□□□ 0.23
SDF2-202ENST00000585428 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 ADAM2Q99965 735 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 GLT8D2Q9H1C3 349 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 LRFN2Q9ULH4 789 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 ST3GAL5Q9UNP4 418 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 KAT6AQ92794 2004 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 NLRC5Q86WI3 1866 aa16.48■□□□□ 0.23
SDF2-202ENST00000585428 IGLV3-22A0A075B6J6 115 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 LOC730098B7Z3J9 87 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 ZBTB43O43298 467 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 GLP2RO95838 553 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 CDC27P30260 824 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 NDUFV1P49821 464 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 NHLH1Q02575 133 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 UBE3AQ05086 875 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 CBX2Q14781 532 aaPredicted RBP16.47■□□□□ 0.23
SDF2-202ENST00000585428 RTN1Q16799 776 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 FAM102BQ5T8I3 360 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 BMP8AQ7Z5Y6 402 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 RBM23Q86U06 439 aaKnown RBP16.47■□□□□ 0.23
SDF2-202ENST00000585428 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
SDF2-202ENST00000585428 MFSD14AQ96MC6 490 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 C1orf112Q9NSG2 853 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 PCDHB12Q9Y5F1 795 aa16.47■□□□□ 0.23
SDF2-202ENST00000585428 MAFBQ9Y5Q3 323 aaPredicted RBP16.47■□□□□ 0.23
SDF2-202ENST00000585428 BACH1O14867 736 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 GPR182O15218 404 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 GPR32O75388 356 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 RPS6KA5O75582 802 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 ZNF76P36508 570 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 CRYBB1P53674 252 aaPredicted RBP16.46■□□□□ 0.23
SDF2-202ENST00000585428 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 ODR4Q5SWX8 454 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 FAM160B1Q5W0V3 765 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 PDXDC2PQ6P474 469 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 PLA2G4DQ86XP0 818 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 TLE6Q9H808 572 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 ZNF302Q9NR11 478 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 TYW1Q9NV66 732 aaKnown RBP16.46■□□□□ 0.23
SDF2-202ENST00000585428 PCDHGC5Q9Y5F6 944 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 COL1A2P08123 1366 aa16.46■□□□□ 0.23
SDF2-202ENST00000585428 DENND3A2RUS2 1198 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 DDX39AO00148 427 aaKnown RBP16.45■□□□□ 0.22
SDF2-202ENST00000585428 IPO5O00410 1097 aaKnown RBP16.45■□□□□ 0.22
SDF2-202ENST00000585428 PER2O15055 1255 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 ADAMTS3O15072 1205 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 ADD1P35611 737 aaKnown RBP16.45■□□□□ 0.22
SDF2-202ENST00000585428 ERVFC1P60507 584 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 DSC3Q14574 896 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 MIS18BP1Q6P0N0 1132 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 MICAL1Q8TDZ2 1067 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 BBXQ8WY36 941 aaPredicted RBP16.45■□□□□ 0.22
SDF2-202ENST00000585428 CWH43Q9H720 699 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 ELAC1Q9H777 363 aaKnown RBP16.45■□□□□ 0.22
SDF2-202ENST00000585428 AAASQ9NRG9 546 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 BARX2Q9UMQ3 279 aaPredicted RBP16.45■□□□□ 0.22
SDF2-202ENST00000585428 GINS2Q9Y248 185 aa16.45■□□□□ 0.22
SDF2-202ENST00000585428 TBKBP1A7MCY6 615 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 FSCN2O14926 492 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 FGF18O76093 207 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 C22orf31O95567 290 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 MRE11P49959 708 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 RCAN1P53805 252 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 KCNC3Q14003 757 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 PFKFB3Q16875 520 aaPredicted RBP16.44■□□□□ 0.22
SDF2-202ENST00000585428 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 PDE12Q6L8Q7 609 aaKnown RBP16.44■□□□□ 0.22
SDF2-202ENST00000585428 TMEM184AQ6ZMB5 413 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 TLR9Q9NR96 1032 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms