RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 BRMS1Q9HCU9 246 aa14.85□□□□□ -0.03
ERBB2-220ENST00000584684 GJB4Q9NTQ9 266 aa14.85□□□□□ -0.03
ERBB2-220ENST00000584684 LIMCH1Q9UPQ0 1083 aa14.85□□□□□ -0.03
ERBB2-220ENST00000584684 SAMM50Q9Y512 469 aa14.85□□□□□ -0.03
ERBB2-220ENST00000584684 EVPLQ92817 2033 aa14.85□□□□□ -0.03
ERBB2-220ENST00000584684 PRRC2BQ5JSZ5 2229 aaKnown RBP14.84□□□□□ -0.03
ERBB2-220ENST00000584684 LINC01553A4QN01 128 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 EPOPA6NHQ4 379 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 TBX3O15119 743 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 SLC37A4O43826 429 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 ZNF862O60290 1169 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 OATP04181 439 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 RBM25P49756 843 aaKnown RBP14.84□□□□□ -0.03
ERBB2-220ENST00000584684 ERVK-21P61565 698 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 PRKCEQ02156 737 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 LETM2Q2VYF4 491 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 ZNF710Q8N1W2 664 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 FAM20AQ96MK3 541 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 TGS1Q96RS0 853 aaKnown RBP14.84□□□□□ -0.03
ERBB2-220ENST00000584684 FTHL17Q9BXU8 183 aa14.84□□□□□ -0.03
ERBB2-220ENST00000584684 AGO3Q9H9G7 860 aaKnown RBP14.84□□□□□ -0.03
ERBB2-220ENST00000584684 NLRC5Q86WI3 1866 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 MAGEB2O15479 319 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 CHMP2AO43633 222 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 MMP1P03956 469 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 KRT2P35908 639 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 PPP2R5CQ13362 524 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 UGCGQ16739 394 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 PIK3AP1Q6ZUJ8 805 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 LINC01465Q8N7H1 131 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 IL27Q8NEV9 243 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 ARNTL2Q8WYA1 636 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 LLPHQ9BRT6 129 aaKnown RBP14.83□□□□□ -0.04
ERBB2-220ENST00000584684 RC3H2Q9HBD1 1191 aaKnown RBP14.83□□□□□ -0.04
ERBB2-220ENST00000584684 VAV3Q9UKW4 847 aa14.83□□□□□ -0.04
ERBB2-220ENST00000584684 SPTBN5Q9NRC6 3674 aaKnown RBP14.82□□□□□ -0.04
ERBB2-220ENST00000584684 JAK2O60674 1132 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 LPXNO60711 386 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 CD52P31358 61 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 PAK2Q13177 524 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 FAM117BQ6P1L5 589 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 MIER3Q7Z3K6 550 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 SPRED2Q7Z698 418 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 GJA10Q969M2 543 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 SAMD11Q96NU1 681 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 YME1L1Q96TA2 773 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
ERBB2-220ENST00000584684 SH2B1Q9NRF2 756 aaPredicted RBP14.82□□□□□ -0.04
ERBB2-220ENST00000584684 NRBP2Q9NSY0 501 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 PADI3Q9ULW8 664 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 MTCH2Q9Y6C9 303 aa14.82□□□□□ -0.04
ERBB2-220ENST00000584684 RBAK-RBAKDNI3L0D1 243 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 GTPBP6O43824 516 aaPredicted RBP14.81□□□□□ -0.04
ERBB2-220ENST00000584684 CCNT1O60563 726 aaKnown RBP14.81□□□□□ -0.04
ERBB2-220ENST00000584684 IGFBP4P22692 258 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 TMEM62Q0P6H9 643 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 NR5A1Q13285 461 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 GRB10Q13322 594 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 TRIM29Q14134 588 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 TARBP2Q15633 366 aaKnown RBP14.81□□□□□ -0.04
ERBB2-220ENST00000584684 XKR3Q5GH77 459 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 EARS2Q5JPH6 523 aaKnown RBP14.81□□□□□ -0.04
ERBB2-220ENST00000584684 ODR4Q5SWX8 454 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 LINC01599Q8WXQ3 324 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 ZSCAN31Q96LW9 406 aaPredicted RBP14.81□□□□□ -0.04
ERBB2-220ENST00000584684 NIFKQ9BYG3 293 aaKnown RBP14.81□□□□□ -0.04
ERBB2-220ENST00000584684 CERS4Q9HA82 394 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 LMCD1Q9NZU5 365 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 XIRP2A4UGR9 3374 aa14.81□□□□□ -0.04
ERBB2-220ENST00000584684 ENPP3O14638 875 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 DTNBO60941 627 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 STBD1O95210 358 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 TMOD1P28289 359 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 CRYBB1P53674 252 aaPredicted RBP14.8□□□□□ -0.04
ERBB2-220ENST00000584684 SPIRE1Q08AE8 756 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 KRT40Q6A162 431 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 DIS3L2Q8IYB7 885 aaKnown RBP14.8□□□□□ -0.04
ERBB2-220ENST00000584684 SLFN12Q8IYM2 578 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 TMEM40Q8WWA1 233 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 HAS1Q92839 578 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 MAP7D2Q96T17 732 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 ERVK-5Q9HDB9 667 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 ADGRA3Q8IWK6 1321 aa14.8□□□□□ -0.04
ERBB2-220ENST00000584684 FAM205CA6NFA0 338 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 RFXAPO00287 272 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 NCOR1O75376 2440 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 GPR32O75388 356 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 PSMC5P62195 406 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 HMGN5P82970 282 aaKnown RBP14.79□□□□□ -0.04
ERBB2-220ENST00000584684 TBC1D8BQ0IIM8 1120 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 KIZQ2M2Z5 673 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 ARID2Q68CP9 1835 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 NPAS4Q8IUM7 802 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 METTL13Q8N6R0 699 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 ZNF689Q96CS4 500 aaPredicted RBP14.79□□□□□ -0.04
ERBB2-220ENST00000584684 CEP89Q96ST8 783 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 TMX1Q9H3N1 280 aa14.79□□□□□ -0.04
ERBB2-220ENST00000584684 SUGCTQ9HAC7 445 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms