RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CLK2P49760 499 aaKnown RBP17.79■□□□□ 0.44
SKA2-209ENST00000583976 EVCP57679 992 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 ANKRD1Q15327 319 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 PUS10Q3MIT2 529 aaKnown RBP17.79■□□□□ 0.44
SKA2-209ENST00000583976 IER5Q5VY09 327 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 CMTR2Q8IYT2 770 aaKnown RBP17.79■□□□□ 0.44
SKA2-209ENST00000583976 ZNF274Q96GC6 653 aaPredicted RBP17.79■□□□□ 0.44
SKA2-209ENST00000583976 IGFLR1Q9H665 355 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 GINS2Q9Y248 185 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 RWDD3Q9Y3V2 267 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
SKA2-209ENST00000583976 SMCO2A6NFE2 343 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 MAFGO15525 162 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 PPFIA3O75145 1194 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 SCG2P13521 617 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
SKA2-209ENST00000583976 RCAN1P53805 252 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 JAKMIP3Q5VZ66 844 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 PLPPR4Q7Z2D5 763 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 CELF4Q9BZC1 486 aaKnown RBP17.78■□□□□ 0.44
SKA2-209ENST00000583976 PLAGL2Q9UPG8 496 aa17.78■□□□□ 0.44
SKA2-209ENST00000583976 EVPLQ92817 2033 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 IGLV3-22A0A075B6J6 115 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 IGKV6D-21A0A0A0MT36 114 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 CCDC196A0A1B0GTZ2 297 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 SMIM35A0A1B0GVV1 85 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 ZBTB42B2RXF5 422 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 MEIS1O00470 390 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 BACH1O14867 736 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 MBTPS2O43462 519 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 DCXO43602 365 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 ATG7O95352 703 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 KRT76Q01546 638 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 AP3B2Q13367 1082 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 RABEP1Q15276 862 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 ADHFE1Q8IWW8 467 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 KLHL23Q8NBE8 558 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 FTHL17Q9BXU8 183 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 CDHR5Q9HBB8 845 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 ERVK-5Q9HDB9 667 aa17.77■□□□□ 0.44
SKA2-209ENST00000583976 KDM3AQ9Y4C1 1321 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 C19orf67A6NJJ6 358 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 PRR33A8MZF0 331 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 FOSP01100 380 aaPredicted RBP17.76■□□□□ 0.43
SKA2-209ENST00000583976 KLRC1P26715 233 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 NFX1Q12986 1120 aaKnown RBP17.76■□□□□ 0.43
SKA2-209ENST00000583976 ABHD15Q6UXT9 468 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 PLA2G4DQ86XP0 818 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 ATP8B4Q8TF62 1192 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 CRYGNQ8WXF5 182 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 PLVAPQ9BX97 442 aa17.76■□□□□ 0.43
SKA2-209ENST00000583976 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
SKA2-209ENST00000583976 NOC2LQ9Y3T9 749 aaKnown RBP17.76■□□□□ 0.43
SKA2-209ENST00000583976 WDR81Q562E7 1941 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 DHX15O43143 795 aaKnown RBP17.75■□□□□ 0.43
SKA2-209ENST00000583976 DTNBO60941 627 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 LARGE1O95461 756 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 GLP2RO95838 553 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 RPLP2P05387 115 aaKnown RBP17.75■□□□□ 0.43
SKA2-209ENST00000583976 ATP4AP20648 1035 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 ZNF76P36508 570 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 NDUFV1P49821 464 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 SCRN1Q12765 414 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 SMAD4Q13485 552 aaKnown RBP17.75■□□□□ 0.43
SKA2-209ENST00000583976 SMAD2Q15796 467 aaKnown RBP17.75■□□□□ 0.43
SKA2-209ENST00000583976 ME3Q16798 604 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 PDXDC2PQ6P474 469 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 TRMT1LQ7Z2T5 733 aaKnown RBP17.75■□□□□ 0.43
SKA2-209ENST00000583976 KIAA0319LQ8IZA0 1049 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 SPPL3Q8TCT6 385 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 RASGRP4Q8TDF6 673 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 POF1BQ8WVV4 589 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 P2RX5Q93086 422 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 PHKBQ93100 1093 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 OSMRQ99650 979 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 MUTYHQ9UIF7 546 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 FAM50BQ9Y247 325 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 SQORQ9Y6N5 450 aa17.75■□□□□ 0.43
SKA2-209ENST00000583976 ZNF318Q5VUA4 2279 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 hCG_1984214I3L0E3 225 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 CPLX1O14810 134 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 C22orf31O95567 290 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 ALADP13716 330 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 SARSP49591 514 aaKnown RBP17.74■□□□□ 0.43
SKA2-209ENST00000583976 RBM10P98175 930 aaKnown RBP17.74■□□□□ 0.43
SKA2-209ENST00000583976 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
SKA2-209ENST00000583976 KIZQ2M2Z5 673 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 FAM228AQ86W67 206 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 ZNF713Q8N859 430 aaPredicted RBP17.74■□□□□ 0.43
SKA2-209ENST00000583976 ZNF302Q9NR11 478 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 CD207Q9UJ71 328 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 LRFN2Q9ULH4 789 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 BARX2Q9UMQ3 279 aaPredicted RBP17.74■□□□□ 0.43
SKA2-209ENST00000583976 COL1A2P08123 1366 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms