RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 APPP05067 770 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 ICAM1P05362 532 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 FGRP09769 529 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 EPB42P16452 691 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 EDNRBP24530 442 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 CTBSQ01459 385 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 RAB30Q15771 203 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 DUSP28Q4G0W2 176 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 BTNL9Q6UXG8 535 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 NSMFQ6X4W1 530 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 KIAA1211Q6ZU35 1233 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 NOL8Q76FK4 1167 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 TBC1D10CQ8IV04 446 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 FAM227BQ96M60 508 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 TMEM47Q9BQJ4 181 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 EPHX3Q9H6B9 360 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 CCPG1Q9ULG6 757 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 RALGAPA2Q2PPJ7 1873 aa9.3□□□□□ -0.92
PPP4R1-225ENST00000583438 ZNF318Q5VUA4 2279 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 ASB14A6NK59 587 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 ATP2A2P16615 1042 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 DEFB103AP81534 67 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 MRPS5P82675 430 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 NFX1Q12986 1120 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 MBTPS1Q14703 1052 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 IQSEC1Q6DN90 963 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 FAM160B2Q86V87 743 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 GJD3Q8N144 294 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 KAT2BQ92831 832 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 SLC30A3Q99726 388 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 WDR11Q9BZH6 1224 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 NAPBQ9H115 298 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 SLC28A3Q9HAS3 691 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 SPC25Q9HBM1 224 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 VTA1Q9NP79 307 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 MSRAQ9UJ68 235 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 ISY1Q9ULR0 285 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 STX8Q9UNK0 236 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 PCDHA11Q9Y5I1 949 aa9.29□□□□□ -0.92
PPP4R1-225ENST00000583438 C2CD2LO14523 706 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 ORC4O43929 436 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 CABYRO75952 493 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 ZFYP08048 801 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 MYL3P08590 195 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 IQCF3P0C7M6 154 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 PDHBP11177 359 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 GNAT2P19087 354 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 POU3F3P20264 500 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 PLA2G5P39877 138 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 RPS6P62753 249 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 GRB10Q13322 594 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 SLC35G1Q2M3R5 365 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 TKFCQ3LXA3 575 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 SYDE2Q5VT97 1194 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 CCDC62Q6P9F0 684 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 DNAJC14Q6Y2X3 702 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 OR6J1Q8NGC5 347 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 GDPD5Q8WTR4 605 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 FSD1Q9BTV5 496 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 RBCK1Q9BYM8 510 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 GSX2Q9BZM3 304 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 AP5M1Q9H0R1 490 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 ANAPC4Q9UJX5 808 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 Q9Y3F1 56 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 SLC4A7Q9Y6M7 1214 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 NEDD4P46934 1319 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 TTC41PQ6P2S7 1318 aa9.28□□□□□ -0.92
PPP4R1-225ENST00000583438 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 TSPY2A6NKD2 308 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 ERC2O15083 957 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 NBNO60934 754 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 XYLBO75191 536 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 SNHG28P0DPA3 235 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 CALML3P27482 149 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 HAND2P61296 217 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 ARHGAP1Q07960 439 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 IKQ13123 557 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 CCDC96Q2M329 555 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 C8orf34Q49A92 452 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 GDF6Q6KF10 455 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 TMC7Q7Z402 723 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 HERC6Q8IVU3 1022 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 CHURC1Q8WUH1 139 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 ARNTL2Q8WYA1 636 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 FAM129BQ96TA1 746 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 IL25Q9H293 177 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 TELO2Q9Y4R8 837 aa9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 CTDP1Q9Y5B0 961 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-225ENST00000583438 PLXNA4Q9HCM2 1894 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 RANBP6O60518 1105 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 FGAP02671 866 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 GOLGA8HP0CJ92 632 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 PCSK2P16519 638 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 MX1P20591 662 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 WDR5P61964 334 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 ZNF200P98182 395 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms