RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ZNF713Q8N859 430 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PGBD1Q96JS3 809 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ANO3Q9BYT9 981 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RIC8AQ9NPQ8 531 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ZDHHC9Q9Y397 364 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 KDM3AQ9Y4C1 1321 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 STXBP3O00186 592 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 LINC01565O15544 149 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MCM4P33991 863 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ZNF76P36508 570 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 NUCB2P80303 420 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 NFX1Q12986 1120 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ITGB3BPQ13352 177 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 AP3B2Q13367 1082 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 CAMK1Q14012 370 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TOB2Q14106 344 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ANKRD1Q15327 319 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 RTN1Q16799 776 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ODR4Q5SWX8 454 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 FAM160B1Q5W0V3 765 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 APOA5Q6Q788 366 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MTHFD1LQ6UB35 978 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 DHX32Q7L7V1 743 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 CRIPAKQ8N1N5 446 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 KLHL23Q8NBE8 558 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 CYP2W1Q8TAV3 490 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 SPPL3Q8TCT6 385 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 POF1BQ8WVV4 589 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 GLT8D2Q9H1C3 349 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 KCNH6Q9H252 994 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 AGO4Q9HCK5 861 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 SH2B1Q9NRF2 756 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TPCN1Q9ULQ1 816 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TRANK1O15050 2925 aa11.02□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MYO7AQ13402 2215 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 SMCO2A6NFE2 343 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MEIS1O00470 390 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 BACH1O14867 736 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ZBTB43O43298 467 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 HBP1O60381 514 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ATG7O95352 703 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 LARGE1O95461 756 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 HMGB1P09429 215 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 IBSPP21815 317 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 DNAJB1P25685 340 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 KLRC1P26715 233 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 SARSP49591 514 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ME3Q16798 604 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TMEM266Q2M3C6 531 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ALYREFQ86V81 257 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 EFHBQ8N7U6 833 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ATP8B4Q8TF62 1192 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 AGXT2Q9BYV1 514 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TMX1Q9H3N1 280 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 AAASQ9NRG9 546 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 C1orf112Q9NSG2 853 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 GINS2Q9Y248 185 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 PCDHB7Q9Y5E2 793 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 COL1A2P08123 1366 aa11.01□□□□□ -0.65
CDK5RAP3-227ENST00000583352 IGKV6D-21A0A0A0MT36 114 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 DENND3A2RUS2 1198 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 RPS6KA5O75582 802 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 EYA4O95677 639 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 CCNE2O96020 404 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 SREBF1P36956 1147 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 NRIP1P48552 1158 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 GATMP50440 423 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ST3GAL1Q11201 340 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 HERC4Q5GLZ8 1057 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ZNF484Q5JVG2 852 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MIS18BP1Q6P0N0 1132 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 NIPA1Q7RTP0 329 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ADGRD2Q7Z7M1 963 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 PLA2G4DQ86XP0 818 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 RNF135Q8IUD6 432 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 FBXL16Q8N461 479 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MSLNLQ96KJ4 702 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MFSD14AQ96MC6 490 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ERVK-5Q9HDB9 667 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 ZNF302Q9NR11 478 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TMEM260Q9NX78 707 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 BARHL2Q9NY43 387 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MUTYHQ9UIF7 546 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 PCDHB12Q9Y5F1 795 aa11□□□□□ -0.65
CDK5RAP3-227ENST00000583352 GOLGA8AA7E2F4 631 aa10.99□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TBKBP1A7MCY6 615 aa10.99□□□□□ -0.65
CDK5RAP3-227ENST00000583352 GOLGA8BA8MQT2 603 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms