RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 PCDHB12Q9Y5F1 795 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 IGKV6D-21A0A0A0MT36 114 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 FSD2A1L4K1 749 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 FOSP01100 380 aaPredicted RBP15.46■□□□□ 0.07
SS18-222ENST00000582792 SPOUT1Q5T280 376 aaKnown RBP15.46■□□□□ 0.07
SS18-222ENST00000582792 WWC2Q6AWC2 1192 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 SGMS1Q86VZ5 419 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 MICAL1Q8TDZ2 1067 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 ATP8B4Q8TF62 1192 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 PGBD1Q96JS3 809 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 CDCA3Q99618 268 aaPredicted RBP15.46■□□□□ 0.07
SS18-222ENST00000582792 ANO3Q9BYT9 981 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 LSG1Q9H089 658 aaKnown RBP15.46■□□□□ 0.07
SS18-222ENST00000582792 CDHR5Q9HBB8 845 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 RIC8AQ9NPQ8 531 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 RGS18Q9NS28 235 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 C1orf112Q9NSG2 853 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
SS18-222ENST00000582792 NOC2LQ9Y3T9 749 aaKnown RBP15.46■□□□□ 0.07
SS18-222ENST00000582792 DENND3A2RUS2 1198 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 TBKBP1A7MCY6 615 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 C9IYK1 514 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 MEIS1O00470 390 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 SLC27A2O14975 620 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 PER2O15055 1255 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 HBP1O60381 514 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 RPS6KA5O75582 802 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 FGF18O76093 207 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 ATF7P17544 494 aaPredicted RBP15.45■□□□□ 0.06
SS18-222ENST00000582792 IBSPP21815 317 aaPredicted RBP15.45■□□□□ 0.06
SS18-222ENST00000582792 PTPN5P54829 565 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 NAPAP54920 295 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 DUSP6Q16828 381 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 ODR4Q5SWX8 454 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 IER5LQ5T953 404 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 TYW1BQ6NUM6 668 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 PPP1R18Q6NYC8 613 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 SLC24A5Q71RS6 500 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 MICU3Q86XE3 530 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 SUGP1Q8IWZ8 645 aaKnown RBP15.45■□□□□ 0.06
SS18-222ENST00000582792 KIAA0319LQ8IZA0 1049 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 VN1R2Q8NFZ6 395 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 TMEM40Q8WWA1 233 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 SUSD6Q92537 303 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 PHOX2BQ99453 314 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 PRRX2Q99811 253 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 ADAM2Q99965 735 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 COL1A2P08123 1366 aa15.45■□□□□ 0.06
SS18-222ENST00000582792 CNTNAP5Q8WYK1 1306 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 CFAP54Q96N23 3096 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 BACH1O14867 736 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 GPR182O15218 404 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 CCNE2O96020 404 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 SREBF1P36956 1147 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 ERVFC1P60507 584 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 RBM10P98175 930 aaKnown RBP15.44■□□□□ 0.06
SS18-222ENST00000582792 FAM102BQ5T8I3 360 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 FAM160B1Q5W0V3 765 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 PDE12Q6L8Q7 609 aaKnown RBP15.44■□□□□ 0.06
SS18-222ENST00000582792 ABHD15Q6UXT9 468 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 FBXL6Q8N531 539 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 COLGALT1Q8NBJ5 622 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 RPGRIP1Q96KN7 1286 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 NEK1Q96PY6 1258 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 TYW1Q9NV66 732 aaKnown RBP15.44■□□□□ 0.06
SS18-222ENST00000582792 ST3GAL5Q9UNP4 418 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 ZDBF2Q9HCK1 2354 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 KMT2EQ8IZD2 1858 aa15.44■□□□□ 0.06
SS18-222ENST00000582792 FSCN2O14926 492 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 ADCY7P51828 1080 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 SIGLEC14Q08ET2 396 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 AP3B2Q13367 1082 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 NECTIN1Q15223 517 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 ZNF484Q5JVG2 852 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 CREB3L3Q68CJ9 461 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 TMEM184AQ6ZMB5 413 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 SYNE3Q6ZMZ3 975 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 NIPA1Q7RTP0 329 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 CCDC60Q8IWA6 550 aaPredicted RBP15.43■□□□□ 0.06
SS18-222ENST00000582792 THNSL1Q8IYQ7 743 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 CWH43Q9H720 699 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 RBM28Q9NW13 759 aaKnown RBP15.43■□□□□ 0.06
SS18-222ENST00000582792 TMEM161AQ9NX61 479 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 TMEM260Q9NX78 707 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 HCSTQ9UBK5 93 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 LZTS1Q9Y250 596 aa15.43■□□□□ 0.06
SS18-222ENST00000582792 ZBTB42B2RXF5 422 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 hCG_1984214I3L0E3 225 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 DDX39AO00148 427 aaKnown RBP15.42■□□□□ 0.06
SS18-222ENST00000582792 LAG3P18627 525 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 CLK2P49760 499 aaKnown RBP15.42■□□□□ 0.06
SS18-222ENST00000582792 CRYBB1P53674 252 aaPredicted RBP15.42■□□□□ 0.06
SS18-222ENST00000582792 FAM189BP81408 668 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 FUT2Q10981 343 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 TCF15Q12870 199 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 KCNC3Q14003 757 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 PDXDC2PQ6P474 469 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 FAM228AQ86W67 206 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms