RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	THPO	P40225	353 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	ARHGAP4	P98171	946 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	APOBR	Q0VD83	1088 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	SMC1A	Q14683	1233 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	CERKL	Q49MI3	558 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	METTL24	Q5JXM2	366 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	HIST2H2BC	Q6DN03	193 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	ATG14	Q6ZNE5	492 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	LRRC69	Q6ZNQ3	347 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	TMPRSS7	Q7RTY8	843 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	NPAS4	Q8IUM7	802 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	SPEM1	Q8N4L4	309 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	FAM26E	Q8N5C1	309 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	SLC22A17	Q8WUG5	538 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	LPIN2	Q92539	896 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	DCBLD2	Q96PD2	775 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	CABP5	Q9NP86	173 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	GNL3L	Q9NVN8	582 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	PUF60	Q9UHX1	559 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	PALD1	Q9ULE6	856 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	TMX2	Q9Y320	296 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	IRAK3	Q9Y616	596 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	TNRC6B	Q9UPQ9	1833 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	PI4KA	P42356	2102 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	CCDC194	A0A1B0GVG4	234 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	RPP40	O75818	363 aa	Known RBP	6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	LDHC	P07864	332 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	BMP3	P12645	472 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	EPCAM	P16422	314 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	GBP2	P32456	591 aa	Predicted RBP	6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	FAM193A	P78312	1265 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	SEPT2	Q15019	361 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	FAM26D	Q5JW98	314 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	TPRG1	Q6ZUI0	275 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	THNSL1	Q8IYQ7	743 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	C7orf31	Q8N865	590 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	COLGALT1	Q8NBJ5	622 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	GLG1	Q92896	1179 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	KATNAL1	Q9BW62	490 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	TCP11L1	Q9NUJ3	509 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	6.09	□□□□□ -1.43	2e-7	■■□□□ 12.3
MSI2-216	ENST00000582772	SERPINB13	Q9UIV8	391 aa		6.09	□□□□□ -1.43
MSI2-216	ENST00000582772	ADAMTS9	Q9P2N4	1935 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	TRABD2B	A6NFA1	517 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	KHNYN	O15037	678 aa	Known RBP	6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	F2	P00734	622 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	SHMT1	P34896	483 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	OAZ1	P54368	228 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	GSTO1	P78417	241 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	PLK5	Q496M5	336 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	CABP7	Q86V35	215 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	LINS1	Q8NG48	757 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	SNRNP27	Q8WVK2	155 aa	Known RBP	6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	NSUN4	Q96CB9	384 aa	Known RBP	6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	SH2D4A	Q9H788	454 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	EHMT1	Q9H9B1	1298 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	CDHR5	Q9HBB8	845 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	LRRC4C	Q9HCJ2	640 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	KIAA1522	Q9P206	1035 aa	Predicted RBP	6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	EVL	Q9UI08	416 aa	Predicted RBP	6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	COG6	Q9Y2V7	657 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	HEMK1	Q9Y5R4	338 aa	Predicted RBP	6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	NBAS	A2RRP1	2371 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	STAB1	Q9NY15	2570 aa		6.08	□□□□□ -1.44
MSI2-216	ENST00000582772	MTCL1	Q9Y4B5	1905 aa	Known RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	RRP8	O43159	456 aa	Known RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	SUV39H1	O43463	412 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	ITGB2	P05107	769 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	FTH1P19	P0C7X4	201 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	MYF5	P13349	255 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	PLCG2	P16885	1265 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	PPM1A	P35813	382 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	TLE3	Q04726	772 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	GAS6	Q14393	721 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	HIC1	Q14526	733 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	WTAP	Q15007	396 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	PPP2R5B	Q15173	497 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	UAP1L1	Q3KQV9	507 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	LRRC24	Q50LG9	513 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	TOGARAM2	Q6ZUX3	1019 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	EEPD1	Q7L9B9	569 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	SPICE1	Q8N0Z3	855 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	MMP21	Q8N119	569 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	PDCD7	Q8N8D1	485 aa	Known RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	SNIP1	Q8TAD8	396 aa	Known RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	PI4K2B	Q8TCG2	481 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	LINC01599	Q8WXQ3	324 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	ARID3A	Q99856	593 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	POLR3GL	Q9BT43	218 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	FAM117A	Q9C073	453 aa		6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	POLM	Q9NP87	494 aa	Predicted RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	A1CF	Q9NQ94	594 aa	Known RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	PDCD11	Q14690	1871 aa	Known RBP	6.07	□□□□□ -1.44
MSI2-216	ENST00000582772	PCDH15	Q96QU1	1955 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	MAN2B1	O00754	1011 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	DKK1	O94907	266 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms