RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 NRBP2Q9NSY0 501 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 CEP131Q9UPN4 1083 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 INSL6Q9Y581 213 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 SQORQ9Y6N5 450 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 LOXHD1Q8IVV2 1947 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 TRANK1O15050 2925 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 C22orf31O95567 290 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 MMP1P03956 469 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 FOSBP53539 338 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 UGCGQ16739 394 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 B3GNT9Q6UX72 402 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 USP38Q8NB14 1042 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 TNFRSF25Q93038 417 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 TOP1MTQ969P6 601 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 FAM20AQ96MK3 541 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 AGO3Q9H9G7 860 aaKnown RBP21.98■■□□□ 1.11
SREBF1-220ENST00000581707 A0A0C4DFX4 3053 aa21.98■■□□□ 1.11
SREBF1-220ENST00000581707 PRUNE2Q8WUY3 3088 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 FAM205CA6NFA0 338 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 MAGEB2O15479 319 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 UPP2O95045 317 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 OATP04181 439 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 PRKCEQ02156 737 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 KRT40Q6A162 431 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 METTL13Q8N6R0 699 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 ARNTL2Q8WYA1 636 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 LLPHQ9BRT6 129 aaKnown RBP21.97■■□□□ 1.11
SREBF1-220ENST00000581707 KCNMB3Q9NPA1 279 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 KDM3AQ9Y4C1 1321 aa21.97■■□□□ 1.11
SREBF1-220ENST00000581707 BTBD18B2RXH4 712 aa21.96■■□□□ 1.11
SREBF1-220ENST00000581707 CD52P31358 61 aa21.96■■□□□ 1.11
SREBF1-220ENST00000581707 DIS3L2Q8IYB7 885 aaKnown RBP21.96■■□□□ 1.11
SREBF1-220ENST00000581707 SH2B1Q9NRF2 756 aaPredicted RBP21.96■■□□□ 1.11
SREBF1-220ENST00000581707 GINS2Q9Y248 185 aa21.96■■□□□ 1.11
SREBF1-220ENST00000581707 UNC80Q8N2C7 3258 aa21.96■■□□□ 1.11
SREBF1-220ENST00000581707 EPOPA6NHQ4 379 aa21.95■■□□□ 1.1
SREBF1-220ENST00000581707 RFXAPO00287 272 aa21.95■■□□□ 1.1
SREBF1-220ENST00000581707 ENPP3O14638 875 aa21.95■■□□□ 1.1
SREBF1-220ENST00000581707 TBX3O15119 743 aa21.95■■□□□ 1.1
SREBF1-220ENST00000581707 MARCH6O60337 910 aa21.95■■□□□ 1.1
SREBF1-220ENST00000581707 HTRA4P83105 476 aaPredicted RBP21.95■■□□□ 1.1
SREBF1-220ENST00000581707 SPRED2Q7Z698 418 aa21.95■■□□□ 1.1
SREBF1-220ENST00000581707 UPF2Q9HAU5 1272 aaKnown RBP21.95■■□□□ 1.1
SREBF1-220ENST00000581707 PADI3Q9ULW8 664 aa21.95■■□□□ 1.1
SREBF1-220ENST00000581707 LINC01553A4QN01 128 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 PAK2Q13177 524 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 PPP2R5CQ13362 524 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 RABEP1Q15276 862 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 EFCAB12Q6NXP0 572 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.94■■□□□ 1.1
SREBF1-220ENST00000581707 PPM1EQ8WY54 764 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 HAS1Q92839 578 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 YME1L1Q96TA2 773 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 FTHL17Q9BXU8 183 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 CDHR5Q9HBB8 845 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 VAV3Q9UKW4 847 aa21.94■■□□□ 1.1
SREBF1-220ENST00000581707 EML1O00423 815 aa21.93■■□□□ 1.1
SREBF1-220ENST00000581707 BAG4O95429 457 aaKnown RBP21.93■■□□□ 1.1
SREBF1-220ENST00000581707 TMOD1P28289 359 aa21.93■■□□□ 1.1
SREBF1-220ENST00000581707 ERVK-21P61565 698 aa21.93■■□□□ 1.1
SREBF1-220ENST00000581707 SAFBQ15424 915 aaKnown RBP eCLIP21.93■■□□□ 1.1
SREBF1-220ENST00000581707 XKR3Q5GH77 459 aa21.93■■□□□ 1.1
SREBF1-220ENST00000581707 POTEDQ86YR6 584 aa21.93■■□□□ 1.1
SREBF1-220ENST00000581707 TGS1Q96RS0 853 aaKnown RBP21.93■■□□□ 1.1
SREBF1-220ENST00000581707 TTC3P53804 2025 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 VTNP04004 478 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 CLCN3P51790 818 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 CRYBB1P53674 252 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-220ENST00000581707 PSMC5P62195 406 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 HMGN5P82970 282 aaKnown RBP21.92■■□□□ 1.1
SREBF1-220ENST00000581707 GUCY1B3Q02153 619 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 TARBP2Q15633 366 aaKnown RBP21.92■■□□□ 1.1
SREBF1-220ENST00000581707 KIZQ2M2Z5 673 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 TMEM266Q2M3C6 531 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 SLFN12Q8IYM2 578 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 BANK1Q8NDB2 785 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 SP7Q8TDD2 431 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-220ENST00000581707 C8orf76Q96K31 380 aa21.92■■□□□ 1.1
SREBF1-220ENST00000581707 NIFKQ9BYG3 293 aaKnown RBP21.92■■□□□ 1.1
SREBF1-220ENST00000581707 SEPT9Q9UHD8 586 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-220ENST00000581707 DDX11L8A8MPP1 907 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 GTPBP6O43824 516 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-220ENST00000581707 GPR32O75388 356 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 RPS6KA5O75582 802 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 STBD1O95210 358 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 POU3F3P20264 500 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-220ENST00000581707 TBC1D8BQ0IIM8 1120 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 NFX1Q12986 1120 aaKnown RBP21.91■■□□□ 1.1
SREBF1-220ENST00000581707 CCDC85BQ15834 202 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-220ENST00000581707 RTN4RL1Q86UN2 441 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-220ENST00000581707 LRRC71Q8N4P6 559 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 LINC01465Q8N7H1 131 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 MAP7D2Q96T17 732 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 PPP1R16BQ96T49 567 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 SUGCTQ9HAC7 445 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 MTUS1Q9ULD2 1270 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 AKT3Q9Y243 479 aa21.91■■□□□ 1.1
SREBF1-220ENST00000581707 NOC2LQ9Y3T9 749 aaKnown RBP21.91■■□□□ 1.1
SREBF1-220ENST00000581707 PRRC2BQ5JSZ5 2229 aaKnown RBP21.91■■□□□ 1.1
SREBF1-220ENST00000581707 ST18O60284 1047 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms