RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 AP3B2Q13367 1082 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 AFAP1L1Q8TED9 768 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 MBOAT7Q96N66 472 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 AP1M1Q9BXS5 423 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 MED4Q9NPJ6 270 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 GCNT4Q9P109 453 aa11.49□□□□□ -0.57
TOP3A-209ENST00000580095 H0YIN7 160 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 LRRN2O75325 713 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 GFPT2O94808 682 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 GNA14O95837 355 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 LRCH2Q5VUJ6 765 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 RINT1Q6NUQ1 792 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 SH2D3CQ8N5H7 860 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 VEZTQ9HBM0 779 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 RSPH14Q9UHP6 348 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 LTBP1Q14766 1721 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 TISP43B9A030 160 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 TGFB1I1O43294 461 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 HEXIM1O94992 359 aaKnown RBP11.48□□□□□ -0.57
TOP3A-209ENST00000580095 KRT14P02533 472 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 MCM3P25205 808 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 DGKZQ13574 1117 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 Q4G0T1 1027 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 CFAP221Q4G0U5 840 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 DPY19L2P1Q6NXN4 242 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 LRRC31Q6UY01 552 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 GOLGA6L1Q8N7Z2 621 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 SLC35C1Q96A29 364 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 ARL8AQ96BM9 186 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 RGS17Q9UGC6 210 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-209ENST00000580095 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
TOP3A-209ENST00000580095 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-209ENST00000580095 IGLV3-22A0A075B6J6 115 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 PPIP5K2O43314 1243 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 SLITRK3O94933 977 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 ARP10275 920 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 AARSP49588 968 aaKnown RBP eCLIP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 STAT2P52630 851 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 EDRF1Q3B7T1 1238 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 EPM2AIP1Q7L775 607 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 GOLGA5Q8TBA6 731 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 MYCBPQ99417 103 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 AIPL1Q9NZN9 384 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 PITPNM2Q9BZ72 1349 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 ANKRD31Q8N7Z5 1873 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 SCN9AQ15858 1988 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 GOLGA6CA6NDK9 693 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 FAM13AO94988 1023 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 GOLGA6DP0CG33 693 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 MARSP56192 900 aaKnown RBP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 ALKBH5Q6P6C2 394 aaKnown RBP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 DDX42Q86XP3 938 aaKnown RBP eCLIP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 NAP1L4Q99733 375 aaKnown RBP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 EDEM3Q9BZQ6 932 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 GLT8D2Q9H1C3 349 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 VIPAS39Q9H9C1 493 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 GOLGA6AQ9NYA3 693 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 CHORDC1Q9UHD1 332 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-209ENST00000580095 TRAF3IP3Q9Y228 551 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 ARFGEF1Q9Y6D6 1849 aa11.47□□□□□ -0.57
TOP3A-209ENST00000580095 TMEM150BA6NC51 233 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 CEP104O60308 925 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 PRLRP16471 622 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 ABCB4P21439 1286 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 EPHA7Q15375 998 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 OTOP1Q7RTM1 612 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 ADAT2Q7Z6V5 191 aaKnown RBP11.46□□□□□ -0.57
TOP3A-209ENST00000580095 C10orf67Q8IYJ2 551 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 GMCL1P1Q8NEA9 526 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 U2AF1L4Q8WU68 220 aaKnown RBP11.46□□□□□ -0.57
TOP3A-209ENST00000580095 FAM20AQ96MK3 541 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 PDGFDQ9GZP0 370 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-209ENST00000580095 TMEM39BQ9GZU3 492 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 SEPT11Q9NVA2 429 aaKnown RBP11.46□□□□□ -0.57
TOP3A-209ENST00000580095 PSD3Q9NYI0 1048 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 NAGPAQ9UK23 515 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 GAS7O60861 476 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.57
TOP3A-209ENST00000580095 MEI1Q5TIA1 1274 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 RNF10Q8N5U6 811 aaKnown RBP11.46□□□□□ -0.57
TOP3A-209ENST00000580095 SYN2Q92777 582 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-209ENST00000580095 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 HSD17B14Q9BPX1 270 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 SIX2Q9NPC8 291 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 HOMER2Q9NSB8 354 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 SERPINA10Q9UK55 444 aa11.46□□□□□ -0.57
TOP3A-209ENST00000580095 RAD51CO43502 376 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.58
TOP3A-209ENST00000580095 ATP1A2P50993 1020 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 GTF2A1P52655 376 aaPredicted RBP11.46□□□□□ -0.58
TOP3A-209ENST00000580095 ARHGAP44Q17R89 818 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 NAA35Q5VZE5 725 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 FRMD5Q7Z6J6 570 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 GLYCTKQ8IVS8 523 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms